Gene : Cagra.0925s0077 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12702//PTHR12702:SF4 - SEC15 Genomic Order:  77
Name:  ? Cagra.0925s0077 Secondary Identifier:  ? PAC:28917165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0077 0.5kb upstream 0.5kb upstream 3990 true Scaffold925: 274069-278058 Capsella grandiflora
Cagra.0925s0077 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 274069-274568 Capsella grandiflora
Cagra.0925s0077 0.5kb downstream 0.5kb downstream 3990 true Scaffold925: 274569-278558 Capsella grandiflora
Cagra.0925s0077 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 278059-278558 Capsella grandiflora
Cagra.0925s0077 1.0kb upstream 1.0kb upstream 4490 true Scaffold925: 273569-278058 Capsella grandiflora
Cagra.0925s0077 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 273569-274568 Capsella grandiflora
Cagra.0925s0077 1.0kb downstream 1.0kb downstream 4490 true Scaffold925: 274569-279058 Capsella grandiflora
Cagra.0925s0077 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 278059-279058 Capsella grandiflora
Cagra.0925s0077 2.0kb upstream 2.0kb upstream 5490 true Scaffold925: 272569-278058 Capsella grandiflora
Cagra.0925s0077 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 272569-274568 Capsella grandiflora
Cagra.0925s0077 2.0kb downstream 2.0kb downstream 5490 true Scaffold925: 274569-280058 Capsella grandiflora
Cagra.0925s0077 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 278059-280058 Capsella grandiflora
Cagra.0925s0077 5.0kb upstream 5.0kb upstream 8490 true Scaffold925: 269569-278058 Capsella grandiflora
Cagra.0925s0077 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 269569-274568 Capsella grandiflora
Cagra.0925s0077 5.0kb downstream 5.0kb downstream 8490 true Scaffold925: 274569-283058 Capsella grandiflora
Cagra.0925s0077 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 278059-283058 Capsella grandiflora
Cagra.0925s0077 10.0kb upstream 10.0kb upstream 13490 true Scaffold925: 264569-278058 Capsella grandiflora
Cagra.0925s0077 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 264569-274568 Capsella grandiflora
Cagra.0925s0077 10.0kb downstream 10.0kb downstream 13490 true Scaffold925: 274569-288058 Capsella grandiflora
Cagra.0925s0077 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 278059-288058 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366981 5261 Brassicaceae View MSA
123827486 5264 Brassicales-Malvales View MSA
124339765 5266 SBM View MSA
124242289 5268 Malvidae View MSA
124063470 5270 Rosid View MSA
123747184 5271 Pentapetalae View MSA
122789290 5272 Eudicot View MSA
122044095 5273 Angiosperm View MSA
121349214 5274 Embryophyte View MSA
123424246 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain