Gene : Cagra.0914s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31235:SF51 - PEROXIDASE 25 Genomic Order:  23
Name:  ? Cagra.0914s0023 Secondary Identifier:  ? PAC:28910525
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0914s0023 0.5kb upstream 0.5kb upstream 2658 true Scaffold914: 107468-110125 Capsella grandiflora
Cagra.0914s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold914: 107468-107967 Capsella grandiflora
Cagra.0914s0023 0.5kb downstream 0.5kb downstream 2178 true Scaffold914: 107968-110145 Capsella grandiflora
Cagra.0914s0023 0.5kb downstream 0.5kb downstream 20 false Scaffold914: 110126-110145 Capsella grandiflora
Cagra.0914s0023 1.0kb upstream 1.0kb upstream 3158 true Scaffold914: 106968-110125 Capsella grandiflora
Cagra.0914s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold914: 106968-107967 Capsella grandiflora
Cagra.0914s0023 1.0kb downstream 1.0kb downstream 2178 true Scaffold914: 107968-110145 Capsella grandiflora
Cagra.0914s0023 1.0kb downstream 1.0kb downstream 20 false Scaffold914: 110126-110145 Capsella grandiflora
Cagra.0914s0023 2.0kb upstream 2.0kb upstream 4158 true Scaffold914: 105968-110125 Capsella grandiflora
Cagra.0914s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold914: 105968-107967 Capsella grandiflora
Cagra.0914s0023 2.0kb downstream 2.0kb downstream 2178 true Scaffold914: 107968-110145 Capsella grandiflora
Cagra.0914s0023 2.0kb downstream 2.0kb downstream 20 false Scaffold914: 110126-110145 Capsella grandiflora
Cagra.0914s0023 5.0kb upstream 5.0kb upstream 7158 true Scaffold914: 102968-110125 Capsella grandiflora
Cagra.0914s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold914: 102968-107967 Capsella grandiflora
Cagra.0914s0023 5.0kb downstream 5.0kb downstream 2178 true Scaffold914: 107968-110145 Capsella grandiflora
Cagra.0914s0023 5.0kb downstream 5.0kb downstream 20 false Scaffold914: 110126-110145 Capsella grandiflora
Cagra.0914s0023 10.0kb upstream 10.0kb upstream 12158 true Scaffold914: 97968-110125 Capsella grandiflora
Cagra.0914s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold914: 97968-107967 Capsella grandiflora
Cagra.0914s0023 10.0kb downstream 10.0kb downstream 2178 true Scaffold914: 107968-110145 Capsella grandiflora
Cagra.0914s0023 10.0kb downstream 10.0kb downstream 20 false Scaffold914: 110126-110145 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377007 5261 Brassicaceae View MSA
123836413 5264 Brassicales-Malvales View MSA
124342166 5266 SBM View MSA
124248571 5268 Malvidae View MSA
124066864 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain