Gene : Cagra.0917s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Genomic Order:  23
Name:  ? Cagra.0917s0023 Secondary Identifier:  ? PAC:28909287
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0023 0.5kb upstream 0.5kb upstream 2388 true Scaffold917: 108208-110595 Capsella grandiflora
Cagra.0917s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 110096-110595 Capsella grandiflora
Cagra.0917s0023 0.5kb downstream 0.5kb downstream 2388 true Scaffold917: 107708-110095 Capsella grandiflora
Cagra.0917s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 107708-108207 Capsella grandiflora
Cagra.0917s0023 1.0kb upstream 1.0kb upstream 2888 true Scaffold917: 108208-111095 Capsella grandiflora
Cagra.0917s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 110096-111095 Capsella grandiflora
Cagra.0917s0023 1.0kb downstream 1.0kb downstream 2888 true Scaffold917: 107208-110095 Capsella grandiflora
Cagra.0917s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 107208-108207 Capsella grandiflora
Cagra.0917s0023 2.0kb upstream 2.0kb upstream 3888 true Scaffold917: 108208-112095 Capsella grandiflora
Cagra.0917s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 110096-112095 Capsella grandiflora
Cagra.0917s0023 2.0kb downstream 2.0kb downstream 3888 true Scaffold917: 106208-110095 Capsella grandiflora
Cagra.0917s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 106208-108207 Capsella grandiflora
Cagra.0917s0023 5.0kb upstream 5.0kb upstream 6888 true Scaffold917: 108208-115095 Capsella grandiflora
Cagra.0917s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold917: 110096-115095 Capsella grandiflora
Cagra.0917s0023 5.0kb downstream 5.0kb downstream 6888 true Scaffold917: 103208-110095 Capsella grandiflora
Cagra.0917s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 103208-108207 Capsella grandiflora
Cagra.0917s0023 10.0kb upstream 10.0kb upstream 11888 true Scaffold917: 108208-120095 Capsella grandiflora
Cagra.0917s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold917: 110096-120095 Capsella grandiflora
Cagra.0917s0023 10.0kb downstream 10.0kb downstream 11888 true Scaffold917: 98208-110095 Capsella grandiflora
Cagra.0917s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 98208-108207 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376641 5261 Brassicaceae View MSA
123835579 5264 Brassicales-Malvales View MSA
124345825 5266 SBM View MSA
124253224 5268 Malvidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain