Gene : Cagra.0917s0057 C. grandiflora v1.1
Defline:  (1 of 27) KOG0087 - GTPase Rab11/YPT3, small G protein superfamily Genomic Order:  57
Name:  ? Cagra.0917s0057 Secondary Identifier:  ? PAC:28909338
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0057 0.5kb upstream 0.5kb upstream 1864 true Scaffold917: 258915-260778 Capsella grandiflora
Cagra.0917s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 260279-260778 Capsella grandiflora
Cagra.0917s0057 0.5kb downstream 0.5kb downstream 1864 true Scaffold917: 258415-260278 Capsella grandiflora
Cagra.0917s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 258415-258914 Capsella grandiflora
Cagra.0917s0057 1.0kb upstream 1.0kb upstream 2364 true Scaffold917: 258915-261278 Capsella grandiflora
Cagra.0917s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 260279-261278 Capsella grandiflora
Cagra.0917s0057 1.0kb downstream 1.0kb downstream 2364 true Scaffold917: 257915-260278 Capsella grandiflora
Cagra.0917s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 257915-258914 Capsella grandiflora
Cagra.0917s0057 2.0kb upstream 2.0kb upstream 3364 true Scaffold917: 258915-262278 Capsella grandiflora
Cagra.0917s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 260279-262278 Capsella grandiflora
Cagra.0917s0057 2.0kb downstream 2.0kb downstream 3364 true Scaffold917: 256915-260278 Capsella grandiflora
Cagra.0917s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 256915-258914 Capsella grandiflora
Cagra.0917s0057 5.0kb upstream 5.0kb upstream 6364 true Scaffold917: 258915-265278 Capsella grandiflora
Cagra.0917s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold917: 260279-265278 Capsella grandiflora
Cagra.0917s0057 5.0kb downstream 5.0kb downstream 6364 true Scaffold917: 253915-260278 Capsella grandiflora
Cagra.0917s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 253915-258914 Capsella grandiflora
Cagra.0917s0057 10.0kb upstream 10.0kb upstream 11364 true Scaffold917: 258915-270278 Capsella grandiflora
Cagra.0917s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold917: 260279-270278 Capsella grandiflora
Cagra.0917s0057 10.0kb downstream 10.0kb downstream 11364 true Scaffold917: 248915-260278 Capsella grandiflora
Cagra.0917s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 248915-258914 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362670 5261 Brassicaceae View MSA
123839371 5264 Brassicales-Malvales View MSA
124337638 5266 SBM View MSA
124250798 5268 Malvidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain