Gene : Cagra.0909s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  4
Name:  ? Cagra.0909s0004 Secondary Identifier:  ? PAC:28916693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0909s0004 0.5kb upstream 0.5kb upstream 3881 true Scaffold909: 6139-10019 Capsella grandiflora
Cagra.0909s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold909: 9520-10019 Capsella grandiflora
Cagra.0909s0004 0.5kb downstream 0.5kb downstream 3881 true Scaffold909: 5639-9519 Capsella grandiflora
Cagra.0909s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold909: 5639-6138 Capsella grandiflora
Cagra.0909s0004 1.0kb upstream 1.0kb upstream 4381 true Scaffold909: 6139-10519 Capsella grandiflora
Cagra.0909s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold909: 9520-10519 Capsella grandiflora
Cagra.0909s0004 1.0kb downstream 1.0kb downstream 4381 true Scaffold909: 5139-9519 Capsella grandiflora
Cagra.0909s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold909: 5139-6138 Capsella grandiflora
Cagra.0909s0004 2.0kb upstream 2.0kb upstream 5381 true Scaffold909: 6139-11519 Capsella grandiflora
Cagra.0909s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold909: 9520-11519 Capsella grandiflora
Cagra.0909s0004 2.0kb downstream 2.0kb downstream 5381 true Scaffold909: 4139-9519 Capsella grandiflora
Cagra.0909s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold909: 4139-6138 Capsella grandiflora
Cagra.0909s0004 5.0kb upstream 5.0kb upstream 8381 true Scaffold909: 6139-14519 Capsella grandiflora
Cagra.0909s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold909: 9520-14519 Capsella grandiflora
Cagra.0909s0004 5.0kb downstream 5.0kb downstream 8381 true Scaffold909: 1139-9519 Capsella grandiflora
Cagra.0909s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold909: 1139-6138 Capsella grandiflora
Cagra.0909s0004 10.0kb upstream 10.0kb upstream 13381 true Scaffold909: 6139-19519 Capsella grandiflora
Cagra.0909s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold909: 9520-19519 Capsella grandiflora
Cagra.0909s0004 10.0kb downstream 10.0kb downstream 9519 true Scaffold909: 1-9519 Capsella grandiflora
Cagra.0909s0004 10.0kb downstream 10.0kb downstream 6138 false Scaffold909: 1-6138 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366990 5261 Brassicaceae View MSA
123834455 5264 Brassicales-Malvales View MSA
124341121 5266 SBM View MSA
124242147 5268 Malvidae View MSA
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain