Gene : Cagra.0897s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14493:SF53 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  6
Name:  ? Cagra.0897s0006 Secondary Identifier:  ? PAC:28902815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0006 0.5kb upstream 0.5kb upstream 1682 true Scaffold897: 22513-24194 Capsella grandiflora
Cagra.0897s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 23695-24194 Capsella grandiflora
Cagra.0897s0006 0.5kb downstream 0.5kb downstream 1682 true Scaffold897: 22013-23694 Capsella grandiflora
Cagra.0897s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 22013-22512 Capsella grandiflora
Cagra.0897s0006 1.0kb upstream 1.0kb upstream 2182 true Scaffold897: 22513-24694 Capsella grandiflora
Cagra.0897s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 23695-24694 Capsella grandiflora
Cagra.0897s0006 1.0kb downstream 1.0kb downstream 2182 true Scaffold897: 21513-23694 Capsella grandiflora
Cagra.0897s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 21513-22512 Capsella grandiflora
Cagra.0897s0006 2.0kb upstream 2.0kb upstream 3182 true Scaffold897: 22513-25694 Capsella grandiflora
Cagra.0897s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 23695-25694 Capsella grandiflora
Cagra.0897s0006 2.0kb downstream 2.0kb downstream 3182 true Scaffold897: 20513-23694 Capsella grandiflora
Cagra.0897s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 20513-22512 Capsella grandiflora
Cagra.0897s0006 5.0kb upstream 5.0kb upstream 6182 true Scaffold897: 22513-28694 Capsella grandiflora
Cagra.0897s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 23695-28694 Capsella grandiflora
Cagra.0897s0006 5.0kb downstream 5.0kb downstream 6182 true Scaffold897: 17513-23694 Capsella grandiflora
Cagra.0897s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 17513-22512 Capsella grandiflora
Cagra.0897s0006 10.0kb upstream 10.0kb upstream 11182 true Scaffold897: 22513-33694 Capsella grandiflora
Cagra.0897s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold897: 23695-33694 Capsella grandiflora
Cagra.0897s0006 10.0kb downstream 10.0kb downstream 11182 true Scaffold897: 12513-23694 Capsella grandiflora
Cagra.0897s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 12513-22512 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378557 5261 Brassicaceae View MSA
123837623 5264 Brassicales-Malvales View MSA
124344221 5266 SBM View MSA
124254194 5268 Malvidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain