Gene : Cagra.0897s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  1
Name:  ? Cagra.0897s0001 Secondary Identifier:  ? PAC:28902780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0001 0.5kb upstream 0.5kb upstream 2834 true Scaffold897: 7812-10645 Capsella grandiflora
Cagra.0897s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 7812-8311 Capsella grandiflora
Cagra.0897s0001 0.5kb downstream 0.5kb downstream 2834 true Scaffold897: 8312-11145 Capsella grandiflora
Cagra.0897s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 10646-11145 Capsella grandiflora
Cagra.0897s0001 1.0kb upstream 1.0kb upstream 3334 true Scaffold897: 7312-10645 Capsella grandiflora
Cagra.0897s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 7312-8311 Capsella grandiflora
Cagra.0897s0001 1.0kb downstream 1.0kb downstream 3334 true Scaffold897: 8312-11645 Capsella grandiflora
Cagra.0897s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 10646-11645 Capsella grandiflora
Cagra.0897s0001 2.0kb upstream 2.0kb upstream 4334 true Scaffold897: 6312-10645 Capsella grandiflora
Cagra.0897s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 6312-8311 Capsella grandiflora
Cagra.0897s0001 2.0kb downstream 2.0kb downstream 4334 true Scaffold897: 8312-12645 Capsella grandiflora
Cagra.0897s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 10646-12645 Capsella grandiflora
Cagra.0897s0001 5.0kb upstream 5.0kb upstream 7334 true Scaffold897: 3312-10645 Capsella grandiflora
Cagra.0897s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 3312-8311 Capsella grandiflora
Cagra.0897s0001 5.0kb downstream 5.0kb downstream 7334 true Scaffold897: 8312-15645 Capsella grandiflora
Cagra.0897s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 10646-15645 Capsella grandiflora
Cagra.0897s0001 10.0kb upstream 10.0kb upstream 10645 true Scaffold897: 1-10645 Capsella grandiflora
Cagra.0897s0001 10.0kb upstream 10.0kb upstream 8311 false Scaffold897: 1-8311 Capsella grandiflora
Cagra.0897s0001 10.0kb downstream 10.0kb downstream 12334 true Scaffold897: 8312-20645 Capsella grandiflora
Cagra.0897s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 10646-20645 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376987 5261 Brassicaceae View MSA
123837291 5264 Brassicales-Malvales View MSA
124338265 5266 SBM View MSA
124250257 5268 Malvidae View MSA
124071742 5270 Rosid View MSA
123752422 5271 Pentapetalae View MSA
122797522 5272 Eudicot View MSA
122049366 5273 Angiosperm View MSA
121344195 5274 Embryophyte View MSA
123379996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain