Gene : Cagra.0897s0034 C. grandiflora v1.1
Defline:  (1 of 2) KOG0144 - RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  34
Name:  ? Cagra.0897s0034 Secondary Identifier:  ? PAC:28902760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0034 0.5kb upstream 0.5kb upstream 3747 true Scaffold897: 116310-120056 Capsella grandiflora
Cagra.0897s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 116310-116809 Capsella grandiflora
Cagra.0897s0034 0.5kb downstream 0.5kb downstream 3747 true Scaffold897: 116810-120556 Capsella grandiflora
Cagra.0897s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 120057-120556 Capsella grandiflora
Cagra.0897s0034 1.0kb upstream 1.0kb upstream 4247 true Scaffold897: 115810-120056 Capsella grandiflora
Cagra.0897s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 115810-116809 Capsella grandiflora
Cagra.0897s0034 1.0kb downstream 1.0kb downstream 4247 true Scaffold897: 116810-121056 Capsella grandiflora
Cagra.0897s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 120057-121056 Capsella grandiflora
Cagra.0897s0034 2.0kb upstream 2.0kb upstream 5247 true Scaffold897: 114810-120056 Capsella grandiflora
Cagra.0897s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 114810-116809 Capsella grandiflora
Cagra.0897s0034 2.0kb downstream 2.0kb downstream 5247 true Scaffold897: 116810-122056 Capsella grandiflora
Cagra.0897s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 120057-122056 Capsella grandiflora
Cagra.0897s0034 5.0kb upstream 5.0kb upstream 8247 true Scaffold897: 111810-120056 Capsella grandiflora
Cagra.0897s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 111810-116809 Capsella grandiflora
Cagra.0897s0034 5.0kb downstream 5.0kb downstream 8247 true Scaffold897: 116810-125056 Capsella grandiflora
Cagra.0897s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 120057-125056 Capsella grandiflora
Cagra.0897s0034 10.0kb upstream 10.0kb upstream 13247 true Scaffold897: 106810-120056 Capsella grandiflora
Cagra.0897s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold897: 106810-116809 Capsella grandiflora
Cagra.0897s0034 10.0kb downstream 10.0kb downstream 13247 true Scaffold897: 116810-130056 Capsella grandiflora
Cagra.0897s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 120057-130056 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375989 5261 Brassicaceae View MSA
123801105 5264 Brassicales-Malvales View MSA
124298443 5266 SBM View MSA
124150085 5268 Malvidae View MSA
123875767 5270 Rosid View MSA
123747202 5271 Pentapetalae View MSA
122791871 5272 Eudicot View MSA
122044702 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349683 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain