Gene : Cagra.0897s0054 C. grandiflora v1.1
Defline:  (1 of 5) KOG3140 - Predicted membrane protein Genomic Order:  54
Name:  ? Cagra.0897s0054 Secondary Identifier:  ? PAC:28902777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0054 0.5kb upstream 0.5kb upstream 3433 true Scaffold897: 188808-192240 Capsella grandiflora
Cagra.0897s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 188808-189307 Capsella grandiflora
Cagra.0897s0054 0.5kb downstream 0.5kb downstream 3433 true Scaffold897: 189308-192740 Capsella grandiflora
Cagra.0897s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 192241-192740 Capsella grandiflora
Cagra.0897s0054 1.0kb upstream 1.0kb upstream 3933 true Scaffold897: 188308-192240 Capsella grandiflora
Cagra.0897s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 188308-189307 Capsella grandiflora
Cagra.0897s0054 1.0kb downstream 1.0kb downstream 3933 true Scaffold897: 189308-193240 Capsella grandiflora
Cagra.0897s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 192241-193240 Capsella grandiflora
Cagra.0897s0054 2.0kb upstream 2.0kb upstream 4933 true Scaffold897: 187308-192240 Capsella grandiflora
Cagra.0897s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 187308-189307 Capsella grandiflora
Cagra.0897s0054 2.0kb downstream 2.0kb downstream 4933 true Scaffold897: 189308-194240 Capsella grandiflora
Cagra.0897s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 192241-194240 Capsella grandiflora
Cagra.0897s0054 5.0kb upstream 5.0kb upstream 7933 true Scaffold897: 184308-192240 Capsella grandiflora
Cagra.0897s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 184308-189307 Capsella grandiflora
Cagra.0897s0054 5.0kb downstream 5.0kb downstream 7933 true Scaffold897: 189308-197240 Capsella grandiflora
Cagra.0897s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 192241-197240 Capsella grandiflora
Cagra.0897s0054 10.0kb upstream 10.0kb upstream 12933 true Scaffold897: 179308-192240 Capsella grandiflora
Cagra.0897s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold897: 179308-189307 Capsella grandiflora
Cagra.0897s0054 10.0kb downstream 10.0kb downstream 12933 true Scaffold897: 189308-202240 Capsella grandiflora
Cagra.0897s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 192241-202240 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360741 5261 Brassicaceae View MSA
123798019 5264 Brassicales-Malvales View MSA
124295707 5266 SBM View MSA
124148074 5268 Malvidae View MSA
124062316 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain