Gene : Cagra.1157s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC Genomic Order:  6
Name:  ? Cagra.1157s0006 Secondary Identifier:  ? PAC:28919337
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0006 0.5kb upstream 0.5kb upstream 3634 true Scaffold1157: 30261-33894 Capsella grandiflora
Cagra.1157s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 33395-33894 Capsella grandiflora
Cagra.1157s0006 0.5kb downstream 0.5kb downstream 3634 true Scaffold1157: 29761-33394 Capsella grandiflora
Cagra.1157s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 29761-30260 Capsella grandiflora
Cagra.1157s0006 1.0kb upstream 1.0kb upstream 4134 true Scaffold1157: 30261-34394 Capsella grandiflora
Cagra.1157s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 33395-34394 Capsella grandiflora
Cagra.1157s0006 1.0kb downstream 1.0kb downstream 4134 true Scaffold1157: 29261-33394 Capsella grandiflora
Cagra.1157s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 29261-30260 Capsella grandiflora
Cagra.1157s0006 2.0kb upstream 2.0kb upstream 5134 true Scaffold1157: 30261-35394 Capsella grandiflora
Cagra.1157s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 33395-35394 Capsella grandiflora
Cagra.1157s0006 2.0kb downstream 2.0kb downstream 5134 true Scaffold1157: 28261-33394 Capsella grandiflora
Cagra.1157s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 28261-30260 Capsella grandiflora
Cagra.1157s0006 5.0kb upstream 5.0kb upstream 8134 true Scaffold1157: 30261-38394 Capsella grandiflora
Cagra.1157s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 33395-38394 Capsella grandiflora
Cagra.1157s0006 5.0kb downstream 5.0kb downstream 8134 true Scaffold1157: 25261-33394 Capsella grandiflora
Cagra.1157s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 25261-30260 Capsella grandiflora
Cagra.1157s0006 10.0kb upstream 10.0kb upstream 13134 true Scaffold1157: 30261-43394 Capsella grandiflora
Cagra.1157s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1157: 33395-43394 Capsella grandiflora
Cagra.1157s0006 10.0kb downstream 10.0kb downstream 13134 true Scaffold1157: 20261-33394 Capsella grandiflora
Cagra.1157s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 20261-30260 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366403 5261 Brassicaceae View MSA
123830319 5264 Brassicales-Malvales View MSA
124337055 5266 SBM View MSA
124239166 5268 Malvidae View MSA
124065360 5270 Rosid View MSA
123738551 5271 Pentapetalae View MSA
122788094 5272 Eudicot View MSA
122045245 5273 Angiosperm View MSA
121346895 5274 Embryophyte View MSA
123424857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain