Gene : Cagra.1157s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR35705:SF2 - WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 2 Genomic Order:  16
Name:  ? Cagra.1157s0016 Secondary Identifier:  ? PAC:28919334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0016 0.5kb upstream 0.5kb upstream 2869 true Scaffold1157: 76509-79377 Capsella grandiflora
Cagra.1157s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 78878-79377 Capsella grandiflora
Cagra.1157s0016 0.5kb downstream 0.5kb downstream 2869 true Scaffold1157: 76009-78877 Capsella grandiflora
Cagra.1157s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 76009-76508 Capsella grandiflora
Cagra.1157s0016 1.0kb upstream 1.0kb upstream 3369 true Scaffold1157: 76509-79877 Capsella grandiflora
Cagra.1157s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 78878-79877 Capsella grandiflora
Cagra.1157s0016 1.0kb downstream 1.0kb downstream 3369 true Scaffold1157: 75509-78877 Capsella grandiflora
Cagra.1157s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 75509-76508 Capsella grandiflora
Cagra.1157s0016 2.0kb upstream 2.0kb upstream 4369 true Scaffold1157: 76509-80877 Capsella grandiflora
Cagra.1157s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 78878-80877 Capsella grandiflora
Cagra.1157s0016 2.0kb downstream 2.0kb downstream 4369 true Scaffold1157: 74509-78877 Capsella grandiflora
Cagra.1157s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 74509-76508 Capsella grandiflora
Cagra.1157s0016 5.0kb upstream 5.0kb upstream 7369 true Scaffold1157: 76509-83877 Capsella grandiflora
Cagra.1157s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 78878-83877 Capsella grandiflora
Cagra.1157s0016 5.0kb downstream 5.0kb downstream 7369 true Scaffold1157: 71509-78877 Capsella grandiflora
Cagra.1157s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 71509-76508 Capsella grandiflora
Cagra.1157s0016 10.0kb upstream 10.0kb upstream 12369 true Scaffold1157: 76509-88877 Capsella grandiflora
Cagra.1157s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1157: 78878-88877 Capsella grandiflora
Cagra.1157s0016 10.0kb downstream 10.0kb downstream 12369 true Scaffold1157: 66509-78877 Capsella grandiflora
Cagra.1157s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 66509-76508 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363084 5261 Brassicaceae View MSA
123840595 5264 Brassicales-Malvales View MSA
124349166 5266 SBM View MSA
124242576 5268 Malvidae View MSA
124064704 5270 Rosid View MSA
123737146 5271 Pentapetalae View MSA
122786197 5272 Eudicot View MSA
122042229 5273 Angiosperm View MSA
121309938 5274 Embryophyte View MSA
123347566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain