Gene : Cagra.1157s0032 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Genomic Order:  32
Name:  ? Cagra.1157s0032 Secondary Identifier:  ? PAC:28919333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0032 0.5kb upstream 0.5kb upstream 4310 true Scaffold1157: 142808-147117 Capsella grandiflora
Cagra.1157s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 146618-147117 Capsella grandiflora
Cagra.1157s0032 0.5kb downstream 0.5kb downstream 4310 true Scaffold1157: 142308-146617 Capsella grandiflora
Cagra.1157s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 142308-142807 Capsella grandiflora
Cagra.1157s0032 1.0kb upstream 1.0kb upstream 4810 true Scaffold1157: 142808-147617 Capsella grandiflora
Cagra.1157s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 146618-147617 Capsella grandiflora
Cagra.1157s0032 1.0kb downstream 1.0kb downstream 4810 true Scaffold1157: 141808-146617 Capsella grandiflora
Cagra.1157s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 141808-142807 Capsella grandiflora
Cagra.1157s0032 2.0kb upstream 2.0kb upstream 5810 true Scaffold1157: 142808-148617 Capsella grandiflora
Cagra.1157s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 146618-148617 Capsella grandiflora
Cagra.1157s0032 2.0kb downstream 2.0kb downstream 5810 true Scaffold1157: 140808-146617 Capsella grandiflora
Cagra.1157s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 140808-142807 Capsella grandiflora
Cagra.1157s0032 5.0kb upstream 5.0kb upstream 8810 true Scaffold1157: 142808-151617 Capsella grandiflora
Cagra.1157s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 146618-151617 Capsella grandiflora
Cagra.1157s0032 5.0kb downstream 5.0kb downstream 8810 true Scaffold1157: 137808-146617 Capsella grandiflora
Cagra.1157s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 137808-142807 Capsella grandiflora
Cagra.1157s0032 10.0kb upstream 10.0kb upstream 11226 true Scaffold1157: 142808-154033 Capsella grandiflora
Cagra.1157s0032 10.0kb upstream 10.0kb upstream 7416 false Scaffold1157: 146618-154033 Capsella grandiflora
Cagra.1157s0032 10.0kb downstream 10.0kb downstream 13810 true Scaffold1157: 132808-146617 Capsella grandiflora
Cagra.1157s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 132808-142807 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122369134 5261 Brassicaceae View MSA
123840374 5264 Brassicales-Malvales View MSA
124350359 5266 SBM View MSA
124246685 5268 Malvidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain