Gene : Cagra.1183s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23410 - RIBOSOMAL PROTEIN L5-RELATED Genomic Order:  4
Name:  ? Cagra.1183s0004 Secondary Identifier:  ? PAC:28897750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1183s0004 0.5kb upstream 0.5kb upstream 2523 true Scaffold1183: 10490-13012 Capsella grandiflora
Cagra.1183s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1183: 10490-10989 Capsella grandiflora
Cagra.1183s0004 0.5kb downstream 0.5kb downstream 2523 true Scaffold1183: 10990-13512 Capsella grandiflora
Cagra.1183s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1183: 13013-13512 Capsella grandiflora
Cagra.1183s0004 1.0kb upstream 1.0kb upstream 3023 true Scaffold1183: 9990-13012 Capsella grandiflora
Cagra.1183s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1183: 9990-10989 Capsella grandiflora
Cagra.1183s0004 1.0kb downstream 1.0kb downstream 3023 true Scaffold1183: 10990-14012 Capsella grandiflora
Cagra.1183s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1183: 13013-14012 Capsella grandiflora
Cagra.1183s0004 2.0kb upstream 2.0kb upstream 4023 true Scaffold1183: 8990-13012 Capsella grandiflora
Cagra.1183s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1183: 8990-10989 Capsella grandiflora
Cagra.1183s0004 2.0kb downstream 2.0kb downstream 4023 true Scaffold1183: 10990-15012 Capsella grandiflora
Cagra.1183s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1183: 13013-15012 Capsella grandiflora
Cagra.1183s0004 5.0kb upstream 5.0kb upstream 7023 true Scaffold1183: 5990-13012 Capsella grandiflora
Cagra.1183s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1183: 5990-10989 Capsella grandiflora
Cagra.1183s0004 5.0kb downstream 5.0kb downstream 7023 true Scaffold1183: 10990-18012 Capsella grandiflora
Cagra.1183s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1183: 13013-18012 Capsella grandiflora
Cagra.1183s0004 10.0kb upstream 10.0kb upstream 12023 true Scaffold1183: 990-13012 Capsella grandiflora
Cagra.1183s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1183: 990-10989 Capsella grandiflora
Cagra.1183s0004 10.0kb downstream 10.0kb downstream 12023 true Scaffold1183: 10990-23012 Capsella grandiflora
Cagra.1183s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1183: 13013-23012 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380335 5261 Brassicaceae View MSA
123831832 5264 Brassicales-Malvales View MSA
124349835 5266 SBM View MSA
124252633 5268 Malvidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain