Gene : Cagra.1164s0002 C. grandiflora v1.1
Defline:  (1 of 5) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  2
Name:  ? Cagra.1164s0002 Secondary Identifier:  ? PAC:28913095
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1164s0002 0.5kb upstream 0.5kb upstream 1780 true Scaffold1164: 2474-4253 Capsella grandiflora
Cagra.1164s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1164: 2474-2973 Capsella grandiflora
Cagra.1164s0002 0.5kb downstream 0.5kb downstream 1780 true Scaffold1164: 2974-4753 Capsella grandiflora
Cagra.1164s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1164: 4254-4753 Capsella grandiflora
Cagra.1164s0002 1.0kb upstream 1.0kb upstream 2280 true Scaffold1164: 1974-4253 Capsella grandiflora
Cagra.1164s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1164: 1974-2973 Capsella grandiflora
Cagra.1164s0002 1.0kb downstream 1.0kb downstream 2280 true Scaffold1164: 2974-5253 Capsella grandiflora
Cagra.1164s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1164: 4254-5253 Capsella grandiflora
Cagra.1164s0002 2.0kb upstream 2.0kb upstream 3280 true Scaffold1164: 974-4253 Capsella grandiflora
Cagra.1164s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1164: 974-2973 Capsella grandiflora
Cagra.1164s0002 2.0kb downstream 2.0kb downstream 2476 true Scaffold1164: 2974-5449 Capsella grandiflora
Cagra.1164s0002 2.0kb downstream 2.0kb downstream 1196 false Scaffold1164: 4254-5449 Capsella grandiflora
Cagra.1164s0002 5.0kb upstream 5.0kb upstream 4253 true Scaffold1164: 1-4253 Capsella grandiflora
Cagra.1164s0002 5.0kb upstream 5.0kb upstream 2973 false Scaffold1164: 1-2973 Capsella grandiflora
Cagra.1164s0002 5.0kb downstream 5.0kb downstream 2476 true Scaffold1164: 2974-5449 Capsella grandiflora
Cagra.1164s0002 5.0kb downstream 5.0kb downstream 1196 false Scaffold1164: 4254-5449 Capsella grandiflora
Cagra.1164s0002 10.0kb upstream 10.0kb upstream 4253 true Scaffold1164: 1-4253 Capsella grandiflora
Cagra.1164s0002 10.0kb upstream 10.0kb upstream 2973 false Scaffold1164: 1-2973 Capsella grandiflora
Cagra.1164s0002 10.0kb downstream 10.0kb downstream 2476 true Scaffold1164: 2974-5449 Capsella grandiflora
Cagra.1164s0002 10.0kb downstream 10.0kb downstream 1196 false Scaffold1164: 4254-5449 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373857 5261 Brassicaceae View MSA
123800636 5264 Brassicales-Malvales View MSA
124298028 5266 SBM View MSA
124149773 5268 Malvidae View MSA
124069550 5270 Rosid View MSA
123749042 5271 Pentapetalae View MSA
122790302 5272 Eudicot View MSA
122044029 5273 Angiosperm View MSA
121350968 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain