Gene : Cagra.1189s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF6 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  2
Name:  ? Cagra.1189s0002 Secondary Identifier:  ? PAC:28908926
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0002 0.5kb upstream 0.5kb upstream 3248 true Scaffold1189: 1460-4707 Capsella grandiflora
Cagra.1189s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 1460-1959 Capsella grandiflora
Cagra.1189s0002 0.5kb downstream 0.5kb downstream 3248 true Scaffold1189: 1960-5207 Capsella grandiflora
Cagra.1189s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 4708-5207 Capsella grandiflora
Cagra.1189s0002 1.0kb upstream 1.0kb upstream 3748 true Scaffold1189: 960-4707 Capsella grandiflora
Cagra.1189s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 960-1959 Capsella grandiflora
Cagra.1189s0002 1.0kb downstream 1.0kb downstream 3748 true Scaffold1189: 1960-5707 Capsella grandiflora
Cagra.1189s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 4708-5707 Capsella grandiflora
Cagra.1189s0002 2.0kb upstream 2.0kb upstream 4707 true Scaffold1189: 1-4707 Capsella grandiflora
Cagra.1189s0002 2.0kb upstream 2.0kb upstream 1959 false Scaffold1189: 1-1959 Capsella grandiflora
Cagra.1189s0002 2.0kb downstream 2.0kb downstream 4748 true Scaffold1189: 1960-6707 Capsella grandiflora
Cagra.1189s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 4708-6707 Capsella grandiflora
Cagra.1189s0002 5.0kb upstream 5.0kb upstream 4707 true Scaffold1189: 1-4707 Capsella grandiflora
Cagra.1189s0002 5.0kb upstream 5.0kb upstream 1959 false Scaffold1189: 1-1959 Capsella grandiflora
Cagra.1189s0002 5.0kb downstream 5.0kb downstream 7748 true Scaffold1189: 1960-9707 Capsella grandiflora
Cagra.1189s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 4708-9707 Capsella grandiflora
Cagra.1189s0002 10.0kb upstream 10.0kb upstream 4707 true Scaffold1189: 1-4707 Capsella grandiflora
Cagra.1189s0002 10.0kb upstream 10.0kb upstream 1959 false Scaffold1189: 1-1959 Capsella grandiflora
Cagra.1189s0002 10.0kb downstream 10.0kb downstream 12748 true Scaffold1189: 1960-14707 Capsella grandiflora
Cagra.1189s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 4708-14707 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362865 5261 Brassicaceae View MSA
123840223 5264 Brassicales-Malvales View MSA
124340656 5266 SBM View MSA
124239672 5268 Malvidae View MSA
124068845 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain