Gene : Cagra.1189s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11700:SF7 - 40S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  6
Name:  ? Cagra.1189s0006 Secondary Identifier:  ? PAC:28908967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0006 0.5kb upstream 0.5kb upstream 1677 true Scaffold1189: 16683-18359 Capsella grandiflora
Cagra.1189s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 16683-17182 Capsella grandiflora
Cagra.1189s0006 0.5kb downstream 0.5kb downstream 1677 true Scaffold1189: 17183-18859 Capsella grandiflora
Cagra.1189s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 18360-18859 Capsella grandiflora
Cagra.1189s0006 1.0kb upstream 1.0kb upstream 2177 true Scaffold1189: 16183-18359 Capsella grandiflora
Cagra.1189s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 16183-17182 Capsella grandiflora
Cagra.1189s0006 1.0kb downstream 1.0kb downstream 2177 true Scaffold1189: 17183-19359 Capsella grandiflora
Cagra.1189s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 18360-19359 Capsella grandiflora
Cagra.1189s0006 2.0kb upstream 2.0kb upstream 3177 true Scaffold1189: 15183-18359 Capsella grandiflora
Cagra.1189s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 15183-17182 Capsella grandiflora
Cagra.1189s0006 2.0kb downstream 2.0kb downstream 3177 true Scaffold1189: 17183-20359 Capsella grandiflora
Cagra.1189s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 18360-20359 Capsella grandiflora
Cagra.1189s0006 5.0kb upstream 5.0kb upstream 6177 true Scaffold1189: 12183-18359 Capsella grandiflora
Cagra.1189s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 12183-17182 Capsella grandiflora
Cagra.1189s0006 5.0kb downstream 5.0kb downstream 6177 true Scaffold1189: 17183-23359 Capsella grandiflora
Cagra.1189s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 18360-23359 Capsella grandiflora
Cagra.1189s0006 10.0kb upstream 10.0kb upstream 11177 true Scaffold1189: 7183-18359 Capsella grandiflora
Cagra.1189s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 7183-17182 Capsella grandiflora
Cagra.1189s0006 10.0kb downstream 10.0kb downstream 11177 true Scaffold1189: 17183-28359 Capsella grandiflora
Cagra.1189s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 18360-28359 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
122371239 5261 Brassicaceae View MSA
123800130 5264 Brassicales-Malvales View MSA
124297578 5266 SBM View MSA
124149429 5268 Malvidae View MSA
123875237 5270 Rosid View MSA
123459095 5271 Pentapetalae View MSA
122494490 5272 Eudicot View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain