Gene : Cagra.1189s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Genomic Order:  13
Name:  ? Cagra.1189s0013 Secondary Identifier:  ? PAC:28908979
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0013 0.5kb upstream 0.5kb upstream 6812 true Scaffold1189: 38000-44811 Capsella grandiflora
Cagra.1189s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 38000-38499 Capsella grandiflora
Cagra.1189s0013 0.5kb downstream 0.5kb downstream 6812 true Scaffold1189: 38500-45311 Capsella grandiflora
Cagra.1189s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 44812-45311 Capsella grandiflora
Cagra.1189s0013 1.0kb upstream 1.0kb upstream 7312 true Scaffold1189: 37500-44811 Capsella grandiflora
Cagra.1189s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 37500-38499 Capsella grandiflora
Cagra.1189s0013 1.0kb downstream 1.0kb downstream 7312 true Scaffold1189: 38500-45811 Capsella grandiflora
Cagra.1189s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 44812-45811 Capsella grandiflora
Cagra.1189s0013 2.0kb upstream 2.0kb upstream 8312 true Scaffold1189: 36500-44811 Capsella grandiflora
Cagra.1189s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 36500-38499 Capsella grandiflora
Cagra.1189s0013 2.0kb downstream 2.0kb downstream 8312 true Scaffold1189: 38500-46811 Capsella grandiflora
Cagra.1189s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 44812-46811 Capsella grandiflora
Cagra.1189s0013 5.0kb upstream 5.0kb upstream 11312 true Scaffold1189: 33500-44811 Capsella grandiflora
Cagra.1189s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 33500-38499 Capsella grandiflora
Cagra.1189s0013 5.0kb downstream 5.0kb downstream 11312 true Scaffold1189: 38500-49811 Capsella grandiflora
Cagra.1189s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 44812-49811 Capsella grandiflora
Cagra.1189s0013 10.0kb upstream 10.0kb upstream 16312 true Scaffold1189: 28500-44811 Capsella grandiflora
Cagra.1189s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 28500-38499 Capsella grandiflora
Cagra.1189s0013 10.0kb downstream 10.0kb downstream 16312 true Scaffold1189: 38500-54811 Capsella grandiflora
Cagra.1189s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 44812-54811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363549 5261 Brassicaceae View MSA
123838389 5264 Brassicales-Malvales View MSA
124343026 5266 SBM View MSA
124242340 5268 Malvidae View MSA
124068885 5270 Rosid View MSA
123740436 5271 Pentapetalae View MSA
122788537 5272 Eudicot View MSA
122049796 5273 Angiosperm View MSA
121350697 5274 Embryophyte View MSA
123381850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain