Gene : Cagra.1189s0022 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31791:SF2 - FRIGIDA-LIKE PROTEIN 4A-RELATED Genomic Order:  22
Name:  ? Cagra.1189s0022 Secondary Identifier:  ? PAC:28908975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0022 0.5kb upstream 0.5kb upstream 2929 true Scaffold1189: 82479-85407 Capsella grandiflora
Cagra.1189s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 82479-82978 Capsella grandiflora
Cagra.1189s0022 0.5kb downstream 0.5kb downstream 2929 true Scaffold1189: 82979-85907 Capsella grandiflora
Cagra.1189s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 85408-85907 Capsella grandiflora
Cagra.1189s0022 1.0kb upstream 1.0kb upstream 3429 true Scaffold1189: 81979-85407 Capsella grandiflora
Cagra.1189s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 81979-82978 Capsella grandiflora
Cagra.1189s0022 1.0kb downstream 1.0kb downstream 3429 true Scaffold1189: 82979-86407 Capsella grandiflora
Cagra.1189s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 85408-86407 Capsella grandiflora
Cagra.1189s0022 2.0kb upstream 2.0kb upstream 4429 true Scaffold1189: 80979-85407 Capsella grandiflora
Cagra.1189s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 80979-82978 Capsella grandiflora
Cagra.1189s0022 2.0kb downstream 2.0kb downstream 4429 true Scaffold1189: 82979-87407 Capsella grandiflora
Cagra.1189s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 85408-87407 Capsella grandiflora
Cagra.1189s0022 5.0kb upstream 5.0kb upstream 7429 true Scaffold1189: 77979-85407 Capsella grandiflora
Cagra.1189s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 77979-82978 Capsella grandiflora
Cagra.1189s0022 5.0kb downstream 5.0kb downstream 7429 true Scaffold1189: 82979-90407 Capsella grandiflora
Cagra.1189s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 85408-90407 Capsella grandiflora
Cagra.1189s0022 10.0kb upstream 10.0kb upstream 12429 true Scaffold1189: 72979-85407 Capsella grandiflora
Cagra.1189s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 72979-82978 Capsella grandiflora
Cagra.1189s0022 10.0kb downstream 10.0kb downstream 12429 true Scaffold1189: 82979-95407 Capsella grandiflora
Cagra.1189s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 85408-95407 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376359 5261 Brassicaceae View MSA
123833168 5264 Brassicales-Malvales View MSA
124339127 5266 SBM View MSA
124239483 5268 Malvidae View MSA
124064726 5270 Rosid View MSA
123738104 5271 Pentapetalae View MSA
122790313 5272 Eudicot View MSA
122044909 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain