Gene : Cagra.1189s0049 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12446:SF21 - CRC DOMAIN-CONTAINING PROTEIN TSO1-RELATED Genomic Order:  49
Name:  ? Cagra.1189s0049 Secondary Identifier:  ? PAC:28908943
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0049 0.5kb upstream 0.5kb upstream 3402 true Scaffold1189: 159284-162685 Capsella grandiflora
Cagra.1189s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 159284-159783 Capsella grandiflora
Cagra.1189s0049 0.5kb downstream 0.5kb downstream 3402 true Scaffold1189: 159784-163185 Capsella grandiflora
Cagra.1189s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 162686-163185 Capsella grandiflora
Cagra.1189s0049 1.0kb upstream 1.0kb upstream 3902 true Scaffold1189: 158784-162685 Capsella grandiflora
Cagra.1189s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 158784-159783 Capsella grandiflora
Cagra.1189s0049 1.0kb downstream 1.0kb downstream 3902 true Scaffold1189: 159784-163685 Capsella grandiflora
Cagra.1189s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 162686-163685 Capsella grandiflora
Cagra.1189s0049 2.0kb upstream 2.0kb upstream 4902 true Scaffold1189: 157784-162685 Capsella grandiflora
Cagra.1189s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 157784-159783 Capsella grandiflora
Cagra.1189s0049 2.0kb downstream 2.0kb downstream 4902 true Scaffold1189: 159784-164685 Capsella grandiflora
Cagra.1189s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 162686-164685 Capsella grandiflora
Cagra.1189s0049 5.0kb upstream 5.0kb upstream 7902 true Scaffold1189: 154784-162685 Capsella grandiflora
Cagra.1189s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 154784-159783 Capsella grandiflora
Cagra.1189s0049 5.0kb downstream 5.0kb downstream 7902 true Scaffold1189: 159784-167685 Capsella grandiflora
Cagra.1189s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 162686-167685 Capsella grandiflora
Cagra.1189s0049 10.0kb upstream 10.0kb upstream 12902 true Scaffold1189: 149784-162685 Capsella grandiflora
Cagra.1189s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 149784-159783 Capsella grandiflora
Cagra.1189s0049 10.0kb downstream 10.0kb downstream 12902 true Scaffold1189: 159784-172685 Capsella grandiflora
Cagra.1189s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 162686-172685 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375339 5261 Brassicaceae View MSA
123837070 5264 Brassicales-Malvales View MSA
124336446 5266 SBM View MSA
124250190 5268 Malvidae View MSA
124072110 5270 Rosid View MSA
123746953 5271 Pentapetalae View MSA
122792977 5272 Eudicot View MSA
122047372 5273 Angiosperm View MSA
121349909 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain