Gene : Cagra.1189s0052 C. grandiflora v1.1
Defline:  (1 of 22) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  52
Name:  ? Cagra.1189s0052 Secondary Identifier:  ? PAC:28908982
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0052 0.5kb upstream 0.5kb upstream 3823 true Scaffold1189: 175547-179369 Capsella grandiflora
Cagra.1189s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 178870-179369 Capsella grandiflora
Cagra.1189s0052 0.5kb downstream 0.5kb downstream 3823 true Scaffold1189: 175047-178869 Capsella grandiflora
Cagra.1189s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 175047-175546 Capsella grandiflora
Cagra.1189s0052 1.0kb upstream 1.0kb upstream 4323 true Scaffold1189: 175547-179869 Capsella grandiflora
Cagra.1189s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 178870-179869 Capsella grandiflora
Cagra.1189s0052 1.0kb downstream 1.0kb downstream 4323 true Scaffold1189: 174547-178869 Capsella grandiflora
Cagra.1189s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 174547-175546 Capsella grandiflora
Cagra.1189s0052 2.0kb upstream 2.0kb upstream 5323 true Scaffold1189: 175547-180869 Capsella grandiflora
Cagra.1189s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 178870-180869 Capsella grandiflora
Cagra.1189s0052 2.0kb downstream 2.0kb downstream 5323 true Scaffold1189: 173547-178869 Capsella grandiflora
Cagra.1189s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 173547-175546 Capsella grandiflora
Cagra.1189s0052 5.0kb upstream 5.0kb upstream 8323 true Scaffold1189: 175547-183869 Capsella grandiflora
Cagra.1189s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 178870-183869 Capsella grandiflora
Cagra.1189s0052 5.0kb downstream 5.0kb downstream 8323 true Scaffold1189: 170547-178869 Capsella grandiflora
Cagra.1189s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 170547-175546 Capsella grandiflora
Cagra.1189s0052 10.0kb upstream 10.0kb upstream 13323 true Scaffold1189: 175547-188869 Capsella grandiflora
Cagra.1189s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 178870-188869 Capsella grandiflora
Cagra.1189s0052 10.0kb downstream 10.0kb downstream 13323 true Scaffold1189: 165547-178869 Capsella grandiflora
Cagra.1189s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 165547-175546 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360813 5261 Brassicaceae View MSA
123841348 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain