Gene : Cagra.1189s0058 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11772:SF8 - ALUMINIUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS-RELATED Genomic Order:  58
Name:  ? Cagra.1189s0058 Secondary Identifier:  ? PAC:28908989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0058 0.5kb upstream 0.5kb upstream 2085 true Scaffold1189: 204298-206382 Capsella grandiflora
Cagra.1189s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 204298-204797 Capsella grandiflora
Cagra.1189s0058 0.5kb downstream 0.5kb downstream 2085 true Scaffold1189: 204798-206882 Capsella grandiflora
Cagra.1189s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 206383-206882 Capsella grandiflora
Cagra.1189s0058 1.0kb upstream 1.0kb upstream 2585 true Scaffold1189: 203798-206382 Capsella grandiflora
Cagra.1189s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 203798-204797 Capsella grandiflora
Cagra.1189s0058 1.0kb downstream 1.0kb downstream 2585 true Scaffold1189: 204798-207382 Capsella grandiflora
Cagra.1189s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 206383-207382 Capsella grandiflora
Cagra.1189s0058 2.0kb upstream 2.0kb upstream 3585 true Scaffold1189: 202798-206382 Capsella grandiflora
Cagra.1189s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 202798-204797 Capsella grandiflora
Cagra.1189s0058 2.0kb downstream 2.0kb downstream 3585 true Scaffold1189: 204798-208382 Capsella grandiflora
Cagra.1189s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 206383-208382 Capsella grandiflora
Cagra.1189s0058 5.0kb upstream 5.0kb upstream 6585 true Scaffold1189: 199798-206382 Capsella grandiflora
Cagra.1189s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 199798-204797 Capsella grandiflora
Cagra.1189s0058 5.0kb downstream 5.0kb downstream 6585 true Scaffold1189: 204798-211382 Capsella grandiflora
Cagra.1189s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 206383-211382 Capsella grandiflora
Cagra.1189s0058 10.0kb upstream 10.0kb upstream 11585 true Scaffold1189: 194798-206382 Capsella grandiflora
Cagra.1189s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 194798-204797 Capsella grandiflora
Cagra.1189s0058 10.0kb downstream 10.0kb downstream 11585 true Scaffold1189: 204798-216382 Capsella grandiflora
Cagra.1189s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 206383-216382 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362100 5261 Brassicaceae View MSA
123835140 5264 Brassicales-Malvales View MSA
124337817 5266 SBM View MSA
124238518 5268 Malvidae View MSA
124062275 5270 Rosid View MSA
123741924 5271 Pentapetalae View MSA
122789894 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain