Gene : Cagra.1131s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15454 - NISCHARIN RELATED Genomic Order:  7
Name:  ? Cagra.1131s0007 Secondary Identifier:  ? PAC:28909697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1131s0007 0.5kb upstream 0.5kb upstream 5877 true Scaffold1131: 16695-22571 Capsella grandiflora
Cagra.1131s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1131: 22072-22571 Capsella grandiflora
Cagra.1131s0007 0.5kb downstream 0.5kb downstream 5877 true Scaffold1131: 16195-22071 Capsella grandiflora
Cagra.1131s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1131: 16195-16694 Capsella grandiflora
Cagra.1131s0007 1.0kb upstream 1.0kb upstream 6377 true Scaffold1131: 16695-23071 Capsella grandiflora
Cagra.1131s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1131: 22072-23071 Capsella grandiflora
Cagra.1131s0007 1.0kb downstream 1.0kb downstream 6377 true Scaffold1131: 15695-22071 Capsella grandiflora
Cagra.1131s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1131: 15695-16694 Capsella grandiflora
Cagra.1131s0007 2.0kb upstream 2.0kb upstream 7377 true Scaffold1131: 16695-24071 Capsella grandiflora
Cagra.1131s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1131: 22072-24071 Capsella grandiflora
Cagra.1131s0007 2.0kb downstream 2.0kb downstream 7377 true Scaffold1131: 14695-22071 Capsella grandiflora
Cagra.1131s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1131: 14695-16694 Capsella grandiflora
Cagra.1131s0007 5.0kb upstream 5.0kb upstream 10377 true Scaffold1131: 16695-27071 Capsella grandiflora
Cagra.1131s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1131: 22072-27071 Capsella grandiflora
Cagra.1131s0007 5.0kb downstream 5.0kb downstream 10377 true Scaffold1131: 11695-22071 Capsella grandiflora
Cagra.1131s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1131: 11695-16694 Capsella grandiflora
Cagra.1131s0007 10.0kb upstream 10.0kb upstream 15377 true Scaffold1131: 16695-32071 Capsella grandiflora
Cagra.1131s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1131: 22072-32071 Capsella grandiflora
Cagra.1131s0007 10.0kb downstream 10.0kb downstream 15377 true Scaffold1131: 6695-22071 Capsella grandiflora
Cagra.1131s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1131: 6695-16694 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363316 5261 Brassicaceae View MSA
123836421 5264 Brassicales-Malvales View MSA
124337466 5266 SBM View MSA
124240168 5268 Malvidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain