Gene : Cagra.1136s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15184//PTHR15184:SF53 - ATP SYNTHASE Genomic Order:  5
Name:  ? Cagra.1136s0005 Secondary Identifier:  ? PAC:28905959
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1136s0005 0.5kb upstream 0.5kb upstream 3283 true Scaffold1136: 10791-14073 Capsella grandiflora
Cagra.1136s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1136: 10791-11290 Capsella grandiflora
Cagra.1136s0005 0.5kb downstream 0.5kb downstream 3283 true Scaffold1136: 11291-14573 Capsella grandiflora
Cagra.1136s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1136: 14074-14573 Capsella grandiflora
Cagra.1136s0005 1.0kb upstream 1.0kb upstream 3783 true Scaffold1136: 10291-14073 Capsella grandiflora
Cagra.1136s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1136: 10291-11290 Capsella grandiflora
Cagra.1136s0005 1.0kb downstream 1.0kb downstream 3783 true Scaffold1136: 11291-15073 Capsella grandiflora
Cagra.1136s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1136: 14074-15073 Capsella grandiflora
Cagra.1136s0005 2.0kb upstream 2.0kb upstream 4783 true Scaffold1136: 9291-14073 Capsella grandiflora
Cagra.1136s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1136: 9291-11290 Capsella grandiflora
Cagra.1136s0005 2.0kb downstream 2.0kb downstream 4783 true Scaffold1136: 11291-16073 Capsella grandiflora
Cagra.1136s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1136: 14074-16073 Capsella grandiflora
Cagra.1136s0005 5.0kb upstream 5.0kb upstream 7783 true Scaffold1136: 6291-14073 Capsella grandiflora
Cagra.1136s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1136: 6291-11290 Capsella grandiflora
Cagra.1136s0005 5.0kb downstream 5.0kb downstream 7783 true Scaffold1136: 11291-19073 Capsella grandiflora
Cagra.1136s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1136: 14074-19073 Capsella grandiflora
Cagra.1136s0005 10.0kb upstream 10.0kb upstream 12783 true Scaffold1136: 1291-14073 Capsella grandiflora
Cagra.1136s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1136: 1291-11290 Capsella grandiflora
Cagra.1136s0005 10.0kb downstream 10.0kb downstream 12783 true Scaffold1136: 11291-24073 Capsella grandiflora
Cagra.1136s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1136: 14074-24073 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364277 5261 Brassicaceae View MSA
123798721 5264 Brassicales-Malvales View MSA
124296322 5266 SBM View MSA
124248961 5268 Malvidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain