Gene : Cagra.1136s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR Genomic Order:  11
Name:  ? Cagra.1136s0011 Secondary Identifier:  ? PAC:28905949
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1136s0011 0.5kb upstream 0.5kb upstream 4586 true Scaffold1136: 31377-35962 Capsella grandiflora
Cagra.1136s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1136: 35463-35962 Capsella grandiflora
Cagra.1136s0011 0.5kb downstream 0.5kb downstream 4586 true Scaffold1136: 30877-35462 Capsella grandiflora
Cagra.1136s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1136: 30877-31376 Capsella grandiflora
Cagra.1136s0011 1.0kb upstream 1.0kb upstream 5086 true Scaffold1136: 31377-36462 Capsella grandiflora
Cagra.1136s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1136: 35463-36462 Capsella grandiflora
Cagra.1136s0011 1.0kb downstream 1.0kb downstream 5086 true Scaffold1136: 30377-35462 Capsella grandiflora
Cagra.1136s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1136: 30377-31376 Capsella grandiflora
Cagra.1136s0011 2.0kb upstream 2.0kb upstream 6086 true Scaffold1136: 31377-37462 Capsella grandiflora
Cagra.1136s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1136: 35463-37462 Capsella grandiflora
Cagra.1136s0011 2.0kb downstream 2.0kb downstream 6086 true Scaffold1136: 29377-35462 Capsella grandiflora
Cagra.1136s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1136: 29377-31376 Capsella grandiflora
Cagra.1136s0011 5.0kb upstream 5.0kb upstream 9086 true Scaffold1136: 31377-40462 Capsella grandiflora
Cagra.1136s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1136: 35463-40462 Capsella grandiflora
Cagra.1136s0011 5.0kb downstream 5.0kb downstream 9086 true Scaffold1136: 26377-35462 Capsella grandiflora
Cagra.1136s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1136: 26377-31376 Capsella grandiflora
Cagra.1136s0011 10.0kb upstream 10.0kb upstream 14086 true Scaffold1136: 31377-45462 Capsella grandiflora
Cagra.1136s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1136: 35463-45462 Capsella grandiflora
Cagra.1136s0011 10.0kb downstream 10.0kb downstream 14086 true Scaffold1136: 21377-35462 Capsella grandiflora
Cagra.1136s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1136: 21377-31376 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374206 5261 Brassicaceae View MSA
123841601 5264 Brassicales-Malvales View MSA
124346258 5266 SBM View MSA
124239985 5268 Malvidae View MSA
124064938 5270 Rosid View MSA
123740720 5271 Pentapetalae View MSA
122785683 5272 Eudicot View MSA
122047327 5273 Angiosperm View MSA
121343812 5274 Embryophyte View MSA
123423812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain