Gene : Cagra.1148s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23019 - NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED Genomic Order:  4
Name:  ? Cagra.1148s0004 Secondary Identifier:  ? PAC:28913237
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1148s0004 0.5kb upstream 0.5kb upstream 12014 true Scaffold1148: 16793-28806 Capsella grandiflora
Cagra.1148s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1148: 16793-17292 Capsella grandiflora
Cagra.1148s0004 0.5kb downstream 0.5kb downstream 12014 true Scaffold1148: 17293-29306 Capsella grandiflora
Cagra.1148s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1148: 28807-29306 Capsella grandiflora
Cagra.1148s0004 1.0kb upstream 1.0kb upstream 12514 true Scaffold1148: 16293-28806 Capsella grandiflora
Cagra.1148s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1148: 16293-17292 Capsella grandiflora
Cagra.1148s0004 1.0kb downstream 1.0kb downstream 12514 true Scaffold1148: 17293-29806 Capsella grandiflora
Cagra.1148s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1148: 28807-29806 Capsella grandiflora
Cagra.1148s0004 2.0kb upstream 2.0kb upstream 13514 true Scaffold1148: 15293-28806 Capsella grandiflora
Cagra.1148s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1148: 15293-17292 Capsella grandiflora
Cagra.1148s0004 2.0kb downstream 2.0kb downstream 13514 true Scaffold1148: 17293-30806 Capsella grandiflora
Cagra.1148s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1148: 28807-30806 Capsella grandiflora
Cagra.1148s0004 5.0kb upstream 5.0kb upstream 16514 true Scaffold1148: 12293-28806 Capsella grandiflora
Cagra.1148s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1148: 12293-17292 Capsella grandiflora
Cagra.1148s0004 5.0kb downstream 5.0kb downstream 16514 true Scaffold1148: 17293-33806 Capsella grandiflora
Cagra.1148s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1148: 28807-33806 Capsella grandiflora
Cagra.1148s0004 10.0kb upstream 10.0kb upstream 21514 true Scaffold1148: 7293-28806 Capsella grandiflora
Cagra.1148s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1148: 7293-17292 Capsella grandiflora
Cagra.1148s0004 10.0kb downstream 10.0kb downstream 21514 true Scaffold1148: 17293-38806 Capsella grandiflora
Cagra.1148s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1148: 28807-38806 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367400 5261 Brassicaceae View MSA
123832963 5264 Brassicales-Malvales View MSA
124350499 5266 SBM View MSA
124242652 5268 Malvidae View MSA
124050751 5270 Rosid View MSA
123750800 5271 Pentapetalae View MSA
122787640 5272 Eudicot View MSA
122045642 5273 Angiosperm View MSA
121344134 5274 Embryophyte View MSA
123379983 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain