Gene : Cagra.1148s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32175:SF2 - SURFEIT LOCUS PROTEIN 2 Genomic Order:  17
Name:  ? Cagra.1148s0017 Secondary Identifier:  ? PAC:28913222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1148s0017 0.5kb upstream 0.5kb upstream 3834 true Scaffold1148: 64301-68134 Capsella grandiflora
Cagra.1148s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold1148: 64301-64800 Capsella grandiflora
Cagra.1148s0017 0.5kb downstream 0.5kb downstream 3834 true Scaffold1148: 64801-68634 Capsella grandiflora
Cagra.1148s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold1148: 68135-68634 Capsella grandiflora
Cagra.1148s0017 1.0kb upstream 1.0kb upstream 4334 true Scaffold1148: 63801-68134 Capsella grandiflora
Cagra.1148s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold1148: 63801-64800 Capsella grandiflora
Cagra.1148s0017 1.0kb downstream 1.0kb downstream 4334 true Scaffold1148: 64801-69134 Capsella grandiflora
Cagra.1148s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold1148: 68135-69134 Capsella grandiflora
Cagra.1148s0017 2.0kb upstream 2.0kb upstream 5334 true Scaffold1148: 62801-68134 Capsella grandiflora
Cagra.1148s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold1148: 62801-64800 Capsella grandiflora
Cagra.1148s0017 2.0kb downstream 2.0kb downstream 5334 true Scaffold1148: 64801-70134 Capsella grandiflora
Cagra.1148s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold1148: 68135-70134 Capsella grandiflora
Cagra.1148s0017 5.0kb upstream 5.0kb upstream 8334 true Scaffold1148: 59801-68134 Capsella grandiflora
Cagra.1148s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold1148: 59801-64800 Capsella grandiflora
Cagra.1148s0017 5.0kb downstream 5.0kb downstream 8334 true Scaffold1148: 64801-73134 Capsella grandiflora
Cagra.1148s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold1148: 68135-73134 Capsella grandiflora
Cagra.1148s0017 10.0kb upstream 10.0kb upstream 13334 true Scaffold1148: 54801-68134 Capsella grandiflora
Cagra.1148s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold1148: 54801-64800 Capsella grandiflora
Cagra.1148s0017 10.0kb downstream 10.0kb downstream 13334 true Scaffold1148: 64801-78134 Capsella grandiflora
Cagra.1148s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold1148: 68135-78134 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372328 5261 Brassicaceae View MSA
123800337 5264 Brassicales-Malvales View MSA
124297758 5266 SBM View MSA
124149565 5268 Malvidae View MSA
123875350 5270 Rosid View MSA
123741636 5271 Pentapetalae View MSA
122789257 5272 Eudicot View MSA
122045153 5273 Angiosperm View MSA
121344193 5274 Embryophyte View MSA
123425861 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain