Gene : Cagra.1148s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11728:SF8 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMIC Genomic Order:  23
Name:  ? Cagra.1148s0023 Secondary Identifier:  ? PAC:28913232
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6118 Capsella grandiflora pathologic  
Cgrandiflora PWY-7411 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1148s0023 0.5kb upstream 0.5kb upstream 1806 true Scaffold1148: 91422-93227 Capsella grandiflora
Cagra.1148s0023 0.5kb upstream 0.5kb upstream 13 false Scaffold1148: 93215-93227 Capsella grandiflora
Cagra.1148s0023 0.5kb downstream 0.5kb downstream 2293 true Scaffold1148: 90922-93214 Capsella grandiflora
Cagra.1148s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold1148: 90922-91421 Capsella grandiflora
Cagra.1148s0023 1.0kb upstream 1.0kb upstream 1806 true Scaffold1148: 91422-93227 Capsella grandiflora
Cagra.1148s0023 1.0kb upstream 1.0kb upstream 13 false Scaffold1148: 93215-93227 Capsella grandiflora
Cagra.1148s0023 1.0kb downstream 1.0kb downstream 2793 true Scaffold1148: 90422-93214 Capsella grandiflora
Cagra.1148s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold1148: 90422-91421 Capsella grandiflora
Cagra.1148s0023 2.0kb upstream 2.0kb upstream 1806 true Scaffold1148: 91422-93227 Capsella grandiflora
Cagra.1148s0023 2.0kb upstream 2.0kb upstream 13 false Scaffold1148: 93215-93227 Capsella grandiflora
Cagra.1148s0023 2.0kb downstream 2.0kb downstream 3793 true Scaffold1148: 89422-93214 Capsella grandiflora
Cagra.1148s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold1148: 89422-91421 Capsella grandiflora
Cagra.1148s0023 5.0kb upstream 5.0kb upstream 1806 true Scaffold1148: 91422-93227 Capsella grandiflora
Cagra.1148s0023 5.0kb upstream 5.0kb upstream 13 false Scaffold1148: 93215-93227 Capsella grandiflora
Cagra.1148s0023 5.0kb downstream 5.0kb downstream 6793 true Scaffold1148: 86422-93214 Capsella grandiflora
Cagra.1148s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold1148: 86422-91421 Capsella grandiflora
Cagra.1148s0023 10.0kb upstream 10.0kb upstream 1806 true Scaffold1148: 91422-93227 Capsella grandiflora
Cagra.1148s0023 10.0kb upstream 10.0kb upstream 13 false Scaffold1148: 93215-93227 Capsella grandiflora
Cagra.1148s0023 10.0kb downstream 10.0kb downstream 11793 true Scaffold1148: 81422-93214 Capsella grandiflora
Cagra.1148s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold1148: 81422-91421 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363698 5261 Brassicaceae View MSA
123832123 5264 Brassicales-Malvales View MSA
124342292 5266 SBM View MSA
124243954 5268 Malvidae View MSA
124071828 5270 Rosid View MSA
123739883 5271 Pentapetalae View MSA
122793723 5272 Eudicot View MSA
122048104 5273 Angiosperm View MSA
121348116 5274 Embryophyte View MSA
123428470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain