Gene : Cagra.1150s0008 C. grandiflora v1.1
Defline:  (1 of 68) PTHR32212:SF112 - FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.1150s0008 Secondary Identifier:  ? PAC:28905421
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1150s0008 0.5kb upstream 0.5kb upstream 2159 true Scaffold1150: 36751-38909 Capsella grandiflora
Cagra.1150s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1150: 38410-38909 Capsella grandiflora
Cagra.1150s0008 0.5kb downstream 0.5kb downstream 2159 true Scaffold1150: 36251-38409 Capsella grandiflora
Cagra.1150s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1150: 36251-36750 Capsella grandiflora
Cagra.1150s0008 1.0kb upstream 1.0kb upstream 2659 true Scaffold1150: 36751-39409 Capsella grandiflora
Cagra.1150s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1150: 38410-39409 Capsella grandiflora
Cagra.1150s0008 1.0kb downstream 1.0kb downstream 2659 true Scaffold1150: 35751-38409 Capsella grandiflora
Cagra.1150s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1150: 35751-36750 Capsella grandiflora
Cagra.1150s0008 2.0kb upstream 2.0kb upstream 3659 true Scaffold1150: 36751-40409 Capsella grandiflora
Cagra.1150s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1150: 38410-40409 Capsella grandiflora
Cagra.1150s0008 2.0kb downstream 2.0kb downstream 3659 true Scaffold1150: 34751-38409 Capsella grandiflora
Cagra.1150s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1150: 34751-36750 Capsella grandiflora
Cagra.1150s0008 5.0kb upstream 5.0kb upstream 6659 true Scaffold1150: 36751-43409 Capsella grandiflora
Cagra.1150s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1150: 38410-43409 Capsella grandiflora
Cagra.1150s0008 5.0kb downstream 5.0kb downstream 6659 true Scaffold1150: 31751-38409 Capsella grandiflora
Cagra.1150s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1150: 31751-36750 Capsella grandiflora
Cagra.1150s0008 10.0kb upstream 10.0kb upstream 11659 true Scaffold1150: 36751-48409 Capsella grandiflora
Cagra.1150s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1150: 38410-48409 Capsella grandiflora
Cagra.1150s0008 10.0kb downstream 10.0kb downstream 11659 true Scaffold1150: 26751-38409 Capsella grandiflora
Cagra.1150s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1150: 26751-36750 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495955 5273 Angiosperm Singleton cluster - no MSA
122332358 5261 Brassicaceae Singleton cluster - no MSA
123773433 5264 Brassicales-Malvales Singleton cluster - no MSA
124271918 5266 SBM Singleton cluster - no MSA
124127849 5268 Malvidae Singleton cluster - no MSA
123856646 5270 Rosid Singleton cluster - no MSA
123442550 5271 Pentapetalae Singleton cluster - no MSA
122478125 5272 Eudicot Singleton cluster - no MSA
120769316 5274 Embryophyte Singleton cluster - no MSA
122811684 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain