Gene : Cagra.1125s0004 C. grandiflora v1.1
Defline:  (1 of 1) KOG4652 - HORMA domain Genomic Order:  4
Name:  ? Cagra.1125s0004 Secondary Identifier:  ? PAC:28910636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1125s0004 0.5kb upstream 0.5kb upstream 5067 true Scaffold1125: 10877-15943 Capsella grandiflora
Cagra.1125s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1125: 10877-11376 Capsella grandiflora
Cagra.1125s0004 0.5kb downstream 0.5kb downstream 5067 true Scaffold1125: 11377-16443 Capsella grandiflora
Cagra.1125s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1125: 15944-16443 Capsella grandiflora
Cagra.1125s0004 1.0kb upstream 1.0kb upstream 5567 true Scaffold1125: 10377-15943 Capsella grandiflora
Cagra.1125s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1125: 10377-11376 Capsella grandiflora
Cagra.1125s0004 1.0kb downstream 1.0kb downstream 5567 true Scaffold1125: 11377-16943 Capsella grandiflora
Cagra.1125s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1125: 15944-16943 Capsella grandiflora
Cagra.1125s0004 2.0kb upstream 2.0kb upstream 6567 true Scaffold1125: 9377-15943 Capsella grandiflora
Cagra.1125s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1125: 9377-11376 Capsella grandiflora
Cagra.1125s0004 2.0kb downstream 2.0kb downstream 6567 true Scaffold1125: 11377-17943 Capsella grandiflora
Cagra.1125s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1125: 15944-17943 Capsella grandiflora
Cagra.1125s0004 5.0kb upstream 5.0kb upstream 9567 true Scaffold1125: 6377-15943 Capsella grandiflora
Cagra.1125s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1125: 6377-11376 Capsella grandiflora
Cagra.1125s0004 5.0kb downstream 5.0kb downstream 9567 true Scaffold1125: 11377-20943 Capsella grandiflora
Cagra.1125s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1125: 15944-20943 Capsella grandiflora
Cagra.1125s0004 10.0kb upstream 10.0kb upstream 14567 true Scaffold1125: 1377-15943 Capsella grandiflora
Cagra.1125s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1125: 1377-11376 Capsella grandiflora
Cagra.1125s0004 10.0kb downstream 10.0kb downstream 14567 true Scaffold1125: 11377-25943 Capsella grandiflora
Cagra.1125s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1125: 15944-25943 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041471 5273 Angiosperm View MSA
122362399 5261 Brassicaceae View MSA
123830826 5264 Brassicales-Malvales View MSA
124338854 5266 SBM View MSA
124242492 5268 Malvidae View MSA
124067688 5270 Rosid View MSA
123740838 5271 Pentapetalae View MSA
122791726 5272 Eudicot View MSA
123429135 5275 Viridiplantae View MSA
121347816 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain