Gene : Cagra.1125s0002 C. grandiflora v1.1
Defline:  (1 of 21) PTHR32153:SF2 - F-BOX/LRR-REPEAT PROTEIN 25-RELATED Genomic Order:  2
Name:  ? Cagra.1125s0002 Secondary Identifier:  ? PAC:28910631
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1125s0002 0.5kb upstream 0.5kb upstream 2653 true Scaffold1125: 5153-7805 Capsella grandiflora
Cagra.1125s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1125: 7306-7805 Capsella grandiflora
Cagra.1125s0002 0.5kb downstream 0.5kb downstream 2653 true Scaffold1125: 4653-7305 Capsella grandiflora
Cagra.1125s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1125: 4653-5152 Capsella grandiflora
Cagra.1125s0002 1.0kb upstream 1.0kb upstream 3153 true Scaffold1125: 5153-8305 Capsella grandiflora
Cagra.1125s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1125: 7306-8305 Capsella grandiflora
Cagra.1125s0002 1.0kb downstream 1.0kb downstream 3153 true Scaffold1125: 4153-7305 Capsella grandiflora
Cagra.1125s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1125: 4153-5152 Capsella grandiflora
Cagra.1125s0002 2.0kb upstream 2.0kb upstream 4153 true Scaffold1125: 5153-9305 Capsella grandiflora
Cagra.1125s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1125: 7306-9305 Capsella grandiflora
Cagra.1125s0002 2.0kb downstream 2.0kb downstream 4153 true Scaffold1125: 3153-7305 Capsella grandiflora
Cagra.1125s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1125: 3153-5152 Capsella grandiflora
Cagra.1125s0002 5.0kb upstream 5.0kb upstream 7153 true Scaffold1125: 5153-12305 Capsella grandiflora
Cagra.1125s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1125: 7306-12305 Capsella grandiflora
Cagra.1125s0002 5.0kb downstream 5.0kb downstream 7153 true Scaffold1125: 153-7305 Capsella grandiflora
Cagra.1125s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1125: 153-5152 Capsella grandiflora
Cagra.1125s0002 10.0kb upstream 10.0kb upstream 12153 true Scaffold1125: 5153-17305 Capsella grandiflora
Cagra.1125s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1125: 7306-17305 Capsella grandiflora
Cagra.1125s0002 10.0kb downstream 10.0kb downstream 7305 true Scaffold1125: 1-7305 Capsella grandiflora
Cagra.1125s0002 10.0kb downstream 10.0kb downstream 5152 false Scaffold1125: 1-5152 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381180 5261 Brassicaceae View MSA
123837353 5264 Brassicales-Malvales View MSA
124322292 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain