Gene : Cagra.1317s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19376:SF32 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 Genomic Order:  13
Name:  ? Cagra.1317s0013 Secondary Identifier:  ? PAC:28910429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0013 0.5kb upstream 0.5kb upstream 10932 true Scaffold1317: 46662-57593 Capsella grandiflora
Cagra.1317s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 57094-57593 Capsella grandiflora
Cagra.1317s0013 0.5kb downstream 0.5kb downstream 10932 true Scaffold1317: 46162-57093 Capsella grandiflora
Cagra.1317s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 46162-46661 Capsella grandiflora
Cagra.1317s0013 1.0kb upstream 1.0kb upstream 11432 true Scaffold1317: 46662-58093 Capsella grandiflora
Cagra.1317s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 57094-58093 Capsella grandiflora
Cagra.1317s0013 1.0kb downstream 1.0kb downstream 11432 true Scaffold1317: 45662-57093 Capsella grandiflora
Cagra.1317s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 45662-46661 Capsella grandiflora
Cagra.1317s0013 2.0kb upstream 2.0kb upstream 12432 true Scaffold1317: 46662-59093 Capsella grandiflora
Cagra.1317s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 57094-59093 Capsella grandiflora
Cagra.1317s0013 2.0kb downstream 2.0kb downstream 12432 true Scaffold1317: 44662-57093 Capsella grandiflora
Cagra.1317s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 44662-46661 Capsella grandiflora
Cagra.1317s0013 5.0kb upstream 5.0kb upstream 15432 true Scaffold1317: 46662-62093 Capsella grandiflora
Cagra.1317s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 57094-62093 Capsella grandiflora
Cagra.1317s0013 5.0kb downstream 5.0kb downstream 15432 true Scaffold1317: 41662-57093 Capsella grandiflora
Cagra.1317s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 41662-46661 Capsella grandiflora
Cagra.1317s0013 10.0kb upstream 10.0kb upstream 20432 true Scaffold1317: 46662-67093 Capsella grandiflora
Cagra.1317s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 57094-67093 Capsella grandiflora
Cagra.1317s0013 10.0kb downstream 10.0kb downstream 20432 true Scaffold1317: 36662-57093 Capsella grandiflora
Cagra.1317s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 36662-46661 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041213 5273 Angiosperm View MSA
122369640 5261 Brassicaceae View MSA
123831375 5264 Brassicales-Malvales View MSA
124343770 5266 SBM View MSA
124243135 5268 Malvidae View MSA
124067709 5270 Rosid View MSA
123749411 5271 Pentapetalae View MSA
122792408 5272 Eudicot View MSA
121346672 5274 Embryophyte View MSA
123424215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain