Gene : Cagra.1317s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11972:SF54 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN H-RELATED Genomic Order:  16
Name:  ? Cagra.1317s0016 Secondary Identifier:  ? PAC:28910451
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0016 0.5kb upstream 0.5kb upstream 4663 true Scaffold1317: 64670-69332 Capsella grandiflora
Cagra.1317s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 68833-69332 Capsella grandiflora
Cagra.1317s0016 0.5kb downstream 0.5kb downstream 4663 true Scaffold1317: 64170-68832 Capsella grandiflora
Cagra.1317s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 64170-64669 Capsella grandiflora
Cagra.1317s0016 1.0kb upstream 1.0kb upstream 5163 true Scaffold1317: 64670-69832 Capsella grandiflora
Cagra.1317s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 68833-69832 Capsella grandiflora
Cagra.1317s0016 1.0kb downstream 1.0kb downstream 5163 true Scaffold1317: 63670-68832 Capsella grandiflora
Cagra.1317s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 63670-64669 Capsella grandiflora
Cagra.1317s0016 2.0kb upstream 2.0kb upstream 6163 true Scaffold1317: 64670-70832 Capsella grandiflora
Cagra.1317s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 68833-70832 Capsella grandiflora
Cagra.1317s0016 2.0kb downstream 2.0kb downstream 6163 true Scaffold1317: 62670-68832 Capsella grandiflora
Cagra.1317s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 62670-64669 Capsella grandiflora
Cagra.1317s0016 5.0kb upstream 5.0kb upstream 9163 true Scaffold1317: 64670-73832 Capsella grandiflora
Cagra.1317s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 68833-73832 Capsella grandiflora
Cagra.1317s0016 5.0kb downstream 5.0kb downstream 9163 true Scaffold1317: 59670-68832 Capsella grandiflora
Cagra.1317s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 59670-64669 Capsella grandiflora
Cagra.1317s0016 10.0kb upstream 10.0kb upstream 14163 true Scaffold1317: 64670-78832 Capsella grandiflora
Cagra.1317s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 68833-78832 Capsella grandiflora
Cagra.1317s0016 10.0kb downstream 10.0kb downstream 14163 true Scaffold1317: 54670-68832 Capsella grandiflora
Cagra.1317s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 54670-64669 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367840 5261 Brassicaceae View MSA
123838935 5264 Brassicales-Malvales View MSA
124344245 5266 SBM View MSA
124239982 5268 Malvidae View MSA
124050262 5270 Rosid View MSA
123737449 5271 Pentapetalae View MSA
122786077 5272 Eudicot View MSA
122047775 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain