Gene : Cagra.1317s0040 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33431:SF2 - GB Genomic Order:  40
Name:  ? Cagra.1317s0040 Secondary Identifier:  ? PAC:28910459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0040 0.5kb upstream 0.5kb upstream 1338 true Scaffold1317: 148482-149819 Capsella grandiflora
Cagra.1317s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 148482-148981 Capsella grandiflora
Cagra.1317s0040 0.5kb downstream 0.5kb downstream 1338 true Scaffold1317: 148982-150319 Capsella grandiflora
Cagra.1317s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 149820-150319 Capsella grandiflora
Cagra.1317s0040 1.0kb upstream 1.0kb upstream 1838 true Scaffold1317: 147982-149819 Capsella grandiflora
Cagra.1317s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 147982-148981 Capsella grandiflora
Cagra.1317s0040 1.0kb downstream 1.0kb downstream 1838 true Scaffold1317: 148982-150819 Capsella grandiflora
Cagra.1317s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 149820-150819 Capsella grandiflora
Cagra.1317s0040 2.0kb upstream 2.0kb upstream 2838 true Scaffold1317: 146982-149819 Capsella grandiflora
Cagra.1317s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 146982-148981 Capsella grandiflora
Cagra.1317s0040 2.0kb downstream 2.0kb downstream 2838 true Scaffold1317: 148982-151819 Capsella grandiflora
Cagra.1317s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 149820-151819 Capsella grandiflora
Cagra.1317s0040 5.0kb upstream 5.0kb upstream 5838 true Scaffold1317: 143982-149819 Capsella grandiflora
Cagra.1317s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 143982-148981 Capsella grandiflora
Cagra.1317s0040 5.0kb downstream 5.0kb downstream 5838 true Scaffold1317: 148982-154819 Capsella grandiflora
Cagra.1317s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 149820-154819 Capsella grandiflora
Cagra.1317s0040 10.0kb upstream 10.0kb upstream 10838 true Scaffold1317: 138982-149819 Capsella grandiflora
Cagra.1317s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 138982-148981 Capsella grandiflora
Cagra.1317s0040 10.0kb downstream 10.0kb downstream 10838 true Scaffold1317: 148982-159819 Capsella grandiflora
Cagra.1317s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 149820-159819 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370312 5261 Brassicaceae View MSA
123799937 5264 Brassicales-Malvales View MSA
124297405 5266 SBM View MSA
124149307 5268 Malvidae View MSA
123875137 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain