Gene : Cagra.1317s0046 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23326:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2 Genomic Order:  46
Name:  ? Cagra.1317s0046 Secondary Identifier:  ? PAC:28910473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0046 0.5kb upstream 0.5kb upstream 5246 true Scaffold1317: 168708-173953 Capsella grandiflora
Cagra.1317s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 173454-173953 Capsella grandiflora
Cagra.1317s0046 0.5kb downstream 0.5kb downstream 5246 true Scaffold1317: 168208-173453 Capsella grandiflora
Cagra.1317s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 168208-168707 Capsella grandiflora
Cagra.1317s0046 1.0kb upstream 1.0kb upstream 5746 true Scaffold1317: 168708-174453 Capsella grandiflora
Cagra.1317s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 173454-174453 Capsella grandiflora
Cagra.1317s0046 1.0kb downstream 1.0kb downstream 5746 true Scaffold1317: 167708-173453 Capsella grandiflora
Cagra.1317s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 167708-168707 Capsella grandiflora
Cagra.1317s0046 2.0kb upstream 2.0kb upstream 6746 true Scaffold1317: 168708-175453 Capsella grandiflora
Cagra.1317s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 173454-175453 Capsella grandiflora
Cagra.1317s0046 2.0kb downstream 2.0kb downstream 6746 true Scaffold1317: 166708-173453 Capsella grandiflora
Cagra.1317s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 166708-168707 Capsella grandiflora
Cagra.1317s0046 5.0kb upstream 5.0kb upstream 9746 true Scaffold1317: 168708-178453 Capsella grandiflora
Cagra.1317s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 173454-178453 Capsella grandiflora
Cagra.1317s0046 5.0kb downstream 5.0kb downstream 9746 true Scaffold1317: 163708-173453 Capsella grandiflora
Cagra.1317s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 163708-168707 Capsella grandiflora
Cagra.1317s0046 10.0kb upstream 10.0kb upstream 14746 true Scaffold1317: 168708-183453 Capsella grandiflora
Cagra.1317s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 173454-183453 Capsella grandiflora
Cagra.1317s0046 10.0kb downstream 10.0kb downstream 14746 true Scaffold1317: 158708-173453 Capsella grandiflora
Cagra.1317s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 158708-168707 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376400 5261 Brassicaceae View MSA
123801238 5264 Brassicales-Malvales View MSA
124298563 5266 SBM View MSA
124250541 5268 Malvidae View MSA
124067266 5270 Rosid View MSA
123746622 5271 Pentapetalae View MSA
122792157 5272 Eudicot View MSA
122049800 5273 Angiosperm View MSA
121348841 5274 Embryophyte View MSA
123428233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain