Gene : Cagra.1317s0047 C. grandiflora v1.1
Defline:  (1 of 2) PTHR27003:SF94 - RECEPTOR-LIKE PROTEIN KINASE HERK 1 Genomic Order:  47
Name:  ? Cagra.1317s0047 Secondary Identifier:  ? PAC:28910436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0047 0.5kb upstream 0.5kb upstream 3629 true Scaffold1317: 175187-178815 Capsella grandiflora
Cagra.1317s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 175187-175686 Capsella grandiflora
Cagra.1317s0047 0.5kb downstream 0.5kb downstream 3629 true Scaffold1317: 175687-179315 Capsella grandiflora
Cagra.1317s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 178816-179315 Capsella grandiflora
Cagra.1317s0047 1.0kb upstream 1.0kb upstream 4129 true Scaffold1317: 174687-178815 Capsella grandiflora
Cagra.1317s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 174687-175686 Capsella grandiflora
Cagra.1317s0047 1.0kb downstream 1.0kb downstream 4129 true Scaffold1317: 175687-179815 Capsella grandiflora
Cagra.1317s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 178816-179815 Capsella grandiflora
Cagra.1317s0047 2.0kb upstream 2.0kb upstream 5129 true Scaffold1317: 173687-178815 Capsella grandiflora
Cagra.1317s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 173687-175686 Capsella grandiflora
Cagra.1317s0047 2.0kb downstream 2.0kb downstream 5129 true Scaffold1317: 175687-180815 Capsella grandiflora
Cagra.1317s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 178816-180815 Capsella grandiflora
Cagra.1317s0047 5.0kb upstream 5.0kb upstream 8129 true Scaffold1317: 170687-178815 Capsella grandiflora
Cagra.1317s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 170687-175686 Capsella grandiflora
Cagra.1317s0047 5.0kb downstream 5.0kb downstream 8129 true Scaffold1317: 175687-183815 Capsella grandiflora
Cagra.1317s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 178816-183815 Capsella grandiflora
Cagra.1317s0047 10.0kb upstream 10.0kb upstream 13129 true Scaffold1317: 165687-178815 Capsella grandiflora
Cagra.1317s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 165687-175686 Capsella grandiflora
Cagra.1317s0047 10.0kb downstream 10.0kb downstream 13129 true Scaffold1317: 175687-188815 Capsella grandiflora
Cagra.1317s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 178816-188815 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370533 5261 Brassicaceae View MSA
123837762 5264 Brassicales-Malvales View MSA
124345538 5266 SBM View MSA
124246443 5268 Malvidae View MSA
124074134 5270 Rosid View MSA
123748316 5271 Pentapetalae View MSA
122789518 5272 Eudicot View MSA
122044350 5273 Angiosperm View MSA
121310282 5274 Embryophyte View MSA
123347811 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain