Gene : Cagra.1317s0064 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12725//PTHR12725:SF68 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  64
Name:  ? Cagra.1317s0064 Secondary Identifier:  ? PAC:28910502
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7204 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0064 0.5kb upstream 0.5kb upstream 2022 true Scaffold1317: 225288-227309 Capsella grandiflora
Cagra.1317s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 225288-225787 Capsella grandiflora
Cagra.1317s0064 0.5kb downstream 0.5kb downstream 2022 true Scaffold1317: 225788-227809 Capsella grandiflora
Cagra.1317s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 227310-227809 Capsella grandiflora
Cagra.1317s0064 1.0kb upstream 1.0kb upstream 2522 true Scaffold1317: 224788-227309 Capsella grandiflora
Cagra.1317s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 224788-225787 Capsella grandiflora
Cagra.1317s0064 1.0kb downstream 1.0kb downstream 2522 true Scaffold1317: 225788-228309 Capsella grandiflora
Cagra.1317s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 227310-228309 Capsella grandiflora
Cagra.1317s0064 2.0kb upstream 2.0kb upstream 3522 true Scaffold1317: 223788-227309 Capsella grandiflora
Cagra.1317s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 223788-225787 Capsella grandiflora
Cagra.1317s0064 2.0kb downstream 2.0kb downstream 3522 true Scaffold1317: 225788-229309 Capsella grandiflora
Cagra.1317s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 227310-229309 Capsella grandiflora
Cagra.1317s0064 5.0kb upstream 5.0kb upstream 6522 true Scaffold1317: 220788-227309 Capsella grandiflora
Cagra.1317s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 220788-225787 Capsella grandiflora
Cagra.1317s0064 5.0kb downstream 5.0kb downstream 6522 true Scaffold1317: 225788-232309 Capsella grandiflora
Cagra.1317s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 227310-232309 Capsella grandiflora
Cagra.1317s0064 10.0kb upstream 10.0kb upstream 11522 true Scaffold1317: 215788-227309 Capsella grandiflora
Cagra.1317s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 215788-225787 Capsella grandiflora
Cagra.1317s0064 10.0kb downstream 10.0kb downstream 11522 true Scaffold1317: 225788-237309 Capsella grandiflora
Cagra.1317s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 227310-237309 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360549 5261 Brassicaceae View MSA
123842437 5264 Brassicales-Malvales View MSA
124323493 5266 SBM View MSA
124254189 5268 Malvidae View MSA
124070818 5270 Rosid View MSA
123749879 5271 Pentapetalae View MSA
122794790 5272 Eudicot View MSA
122045450 5273 Angiosperm View MSA
121348248 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain