Gene : Cagra.1097s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11712:SF275 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL Genomic Order:  8
Name:  ? Cagra.1097s0008 Secondary Identifier:  ? PAC:28912831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora FASYN-ELONG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-5971 Capsella grandiflora pathologic  
Cgrandiflora PWY-5989 Capsella grandiflora pathologic  
Cgrandiflora PWY-6282 Capsella grandiflora pathologic  
Cgrandiflora PWY-7388 Capsella grandiflora pathologic  
Cgrandiflora PWY-7663 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1097s0008 0.5kb upstream 0.5kb upstream 4007 true Scaffold1097: 30897-34903 Capsella grandiflora
Cagra.1097s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1097: 34404-34903 Capsella grandiflora
Cagra.1097s0008 0.5kb downstream 0.5kb downstream 4007 true Scaffold1097: 30397-34403 Capsella grandiflora
Cagra.1097s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1097: 30397-30896 Capsella grandiflora
Cagra.1097s0008 1.0kb upstream 1.0kb upstream 4507 true Scaffold1097: 30897-35403 Capsella grandiflora
Cagra.1097s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1097: 34404-35403 Capsella grandiflora
Cagra.1097s0008 1.0kb downstream 1.0kb downstream 4507 true Scaffold1097: 29897-34403 Capsella grandiflora
Cagra.1097s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1097: 29897-30896 Capsella grandiflora
Cagra.1097s0008 2.0kb upstream 2.0kb upstream 5507 true Scaffold1097: 30897-36403 Capsella grandiflora
Cagra.1097s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1097: 34404-36403 Capsella grandiflora
Cagra.1097s0008 2.0kb downstream 2.0kb downstream 5507 true Scaffold1097: 28897-34403 Capsella grandiflora
Cagra.1097s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1097: 28897-30896 Capsella grandiflora
Cagra.1097s0008 5.0kb upstream 5.0kb upstream 8507 true Scaffold1097: 30897-39403 Capsella grandiflora
Cagra.1097s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1097: 34404-39403 Capsella grandiflora
Cagra.1097s0008 5.0kb downstream 5.0kb downstream 8507 true Scaffold1097: 25897-34403 Capsella grandiflora
Cagra.1097s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1097: 25897-30896 Capsella grandiflora
Cagra.1097s0008 10.0kb upstream 10.0kb upstream 13507 true Scaffold1097: 30897-44403 Capsella grandiflora
Cagra.1097s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1097: 34404-44403 Capsella grandiflora
Cagra.1097s0008 10.0kb downstream 10.0kb downstream 13507 true Scaffold1097: 20897-34403 Capsella grandiflora
Cagra.1097s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1097: 20897-30896 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371309 5261 Brassicaceae View MSA
123829991 5264 Brassicales-Malvales View MSA
124344955 5266 SBM View MSA
124240268 5268 Malvidae View MSA
124060523 5270 Rosid View MSA
123738041 5271 Pentapetalae View MSA
122786623 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain