Gene : Cagra.1103s0007 C. grandiflora v1.1
Defline:  (1 of 4) PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Genomic Order:  7
Name:  ? Cagra.1103s0007 Secondary Identifier:  ? PAC:28898785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1103s0007 0.5kb upstream 0.5kb upstream 1475 true Scaffold1103: 19167-20641 Capsella grandiflora
Cagra.1103s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1103: 20142-20641 Capsella grandiflora
Cagra.1103s0007 0.5kb downstream 0.5kb downstream 1475 true Scaffold1103: 18667-20141 Capsella grandiflora
Cagra.1103s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1103: 18667-19166 Capsella grandiflora
Cagra.1103s0007 1.0kb upstream 1.0kb upstream 1975 true Scaffold1103: 19167-21141 Capsella grandiflora
Cagra.1103s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1103: 20142-21141 Capsella grandiflora
Cagra.1103s0007 1.0kb downstream 1.0kb downstream 1975 true Scaffold1103: 18167-20141 Capsella grandiflora
Cagra.1103s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1103: 18167-19166 Capsella grandiflora
Cagra.1103s0007 2.0kb upstream 2.0kb upstream 2975 true Scaffold1103: 19167-22141 Capsella grandiflora
Cagra.1103s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1103: 20142-22141 Capsella grandiflora
Cagra.1103s0007 2.0kb downstream 2.0kb downstream 2975 true Scaffold1103: 17167-20141 Capsella grandiflora
Cagra.1103s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1103: 17167-19166 Capsella grandiflora
Cagra.1103s0007 5.0kb upstream 5.0kb upstream 5975 true Scaffold1103: 19167-25141 Capsella grandiflora
Cagra.1103s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1103: 20142-25141 Capsella grandiflora
Cagra.1103s0007 5.0kb downstream 5.0kb downstream 5975 true Scaffold1103: 14167-20141 Capsella grandiflora
Cagra.1103s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1103: 14167-19166 Capsella grandiflora
Cagra.1103s0007 10.0kb upstream 10.0kb upstream 10975 true Scaffold1103: 19167-30141 Capsella grandiflora
Cagra.1103s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1103: 20142-30141 Capsella grandiflora
Cagra.1103s0007 10.0kb downstream 10.0kb downstream 10975 true Scaffold1103: 9167-20141 Capsella grandiflora
Cagra.1103s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1103: 9167-19166 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377094 5261 Brassicaceae View MSA
123801441 5264 Brassicales-Malvales View MSA
124298742 5266 SBM View MSA
124150315 5268 Malvidae View MSA
124050776 5270 Rosid View MSA
123748032 5271 Pentapetalae View MSA
122792151 5272 Eudicot View MSA
122043833 5273 Angiosperm View MSA
121310197 5274 Embryophyte View MSA
123347755 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain