Gene : Cagra.1105s0005 C. grandiflora v1.1
Defline:  (1 of 1) PF00226//PF14237 - DnaJ domain (DnaJ) // Domain of unknown function (DUF4339) (DUF4339) Genomic Order:  5
Name:  ? Cagra.1105s0005 Secondary Identifier:  ? PAC:28911162
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1105s0005 0.5kb upstream 0.5kb upstream 12501 true Scaffold1105: 35081-47581 Capsella grandiflora
Cagra.1105s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1105: 35081-35580 Capsella grandiflora
Cagra.1105s0005 0.5kb downstream 0.5kb downstream 12501 true Scaffold1105: 35581-48081 Capsella grandiflora
Cagra.1105s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1105: 47582-48081 Capsella grandiflora
Cagra.1105s0005 1.0kb upstream 1.0kb upstream 13001 true Scaffold1105: 34581-47581 Capsella grandiflora
Cagra.1105s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1105: 34581-35580 Capsella grandiflora
Cagra.1105s0005 1.0kb downstream 1.0kb downstream 13001 true Scaffold1105: 35581-48581 Capsella grandiflora
Cagra.1105s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1105: 47582-48581 Capsella grandiflora
Cagra.1105s0005 2.0kb upstream 2.0kb upstream 14001 true Scaffold1105: 33581-47581 Capsella grandiflora
Cagra.1105s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1105: 33581-35580 Capsella grandiflora
Cagra.1105s0005 2.0kb downstream 2.0kb downstream 14001 true Scaffold1105: 35581-49581 Capsella grandiflora
Cagra.1105s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1105: 47582-49581 Capsella grandiflora
Cagra.1105s0005 5.0kb upstream 5.0kb upstream 17001 true Scaffold1105: 30581-47581 Capsella grandiflora
Cagra.1105s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1105: 30581-35580 Capsella grandiflora
Cagra.1105s0005 5.0kb downstream 5.0kb downstream 17001 true Scaffold1105: 35581-52581 Capsella grandiflora
Cagra.1105s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1105: 47582-52581 Capsella grandiflora
Cagra.1105s0005 10.0kb upstream 10.0kb upstream 22001 true Scaffold1105: 25581-47581 Capsella grandiflora
Cagra.1105s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1105: 25581-35580 Capsella grandiflora
Cagra.1105s0005 10.0kb downstream 10.0kb downstream 17666 true Scaffold1105: 35581-53246 Capsella grandiflora
Cagra.1105s0005 10.0kb downstream 10.0kb downstream 5665 false Scaffold1105: 47582-53246 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374284 5261 Brassicaceae View MSA
123830157 5264 Brassicales-Malvales View MSA
124346224 5266 SBM View MSA
124241552 5268 Malvidae View MSA
124064513 5270 Rosid View MSA
123749197 5271 Pentapetalae View MSA
122786662 5272 Eudicot View MSA
122042552 5273 Angiosperm View MSA
121345444 5274 Embryophyte View MSA
123428127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain