Gene : Cagra.1110s0007 C. grandiflora v1.1
Defline:  (1 of 6) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  7
Name:  ? Cagra.1110s0007 Secondary Identifier:  ? PAC:28912594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1110s0007 0.5kb upstream 0.5kb upstream 3250 true Scaffold1110: 21760-25009 Capsella grandiflora
Cagra.1110s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1110: 21760-22259 Capsella grandiflora
Cagra.1110s0007 0.5kb downstream 0.5kb downstream 3250 true Scaffold1110: 22260-25509 Capsella grandiflora
Cagra.1110s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1110: 25010-25509 Capsella grandiflora
Cagra.1110s0007 1.0kb upstream 1.0kb upstream 3750 true Scaffold1110: 21260-25009 Capsella grandiflora
Cagra.1110s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1110: 21260-22259 Capsella grandiflora
Cagra.1110s0007 1.0kb downstream 1.0kb downstream 3750 true Scaffold1110: 22260-26009 Capsella grandiflora
Cagra.1110s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1110: 25010-26009 Capsella grandiflora
Cagra.1110s0007 2.0kb upstream 2.0kb upstream 4750 true Scaffold1110: 20260-25009 Capsella grandiflora
Cagra.1110s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1110: 20260-22259 Capsella grandiflora
Cagra.1110s0007 2.0kb downstream 2.0kb downstream 4750 true Scaffold1110: 22260-27009 Capsella grandiflora
Cagra.1110s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1110: 25010-27009 Capsella grandiflora
Cagra.1110s0007 5.0kb upstream 5.0kb upstream 7750 true Scaffold1110: 17260-25009 Capsella grandiflora
Cagra.1110s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1110: 17260-22259 Capsella grandiflora
Cagra.1110s0007 5.0kb downstream 5.0kb downstream 7750 true Scaffold1110: 22260-30009 Capsella grandiflora
Cagra.1110s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1110: 25010-30009 Capsella grandiflora
Cagra.1110s0007 10.0kb upstream 10.0kb upstream 12750 true Scaffold1110: 12260-25009 Capsella grandiflora
Cagra.1110s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1110: 12260-22259 Capsella grandiflora
Cagra.1110s0007 10.0kb downstream 10.0kb downstream 12750 true Scaffold1110: 22260-35009 Capsella grandiflora
Cagra.1110s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1110: 25010-35009 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368546 5261 Brassicaceae View MSA
123835231 5264 Brassicales-Malvales View MSA
124351095 5266 SBM View MSA
124254047 5268 Malvidae View MSA
124070890 5270 Rosid View MSA
123742803 5271 Pentapetalae View MSA
122796350 5272 Eudicot View MSA
122042396 5273 Angiosperm View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain