Gene : Cagra.1110s0009 C. grandiflora v1.1
Genomic Order:  9 Name:  ? Cagra.1110s0009
Secondary Identifier:  ? PAC:28912595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1110s0009 0.5kb upstream 0.5kb upstream 1562 true Scaffold1110: 31220-32781 Capsella grandiflora
Cagra.1110s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1110: 32282-32781 Capsella grandiflora
Cagra.1110s0009 0.5kb downstream 0.5kb downstream 1562 true Scaffold1110: 30720-32281 Capsella grandiflora
Cagra.1110s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1110: 30720-31219 Capsella grandiflora
Cagra.1110s0009 1.0kb upstream 1.0kb upstream 2062 true Scaffold1110: 31220-33281 Capsella grandiflora
Cagra.1110s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1110: 32282-33281 Capsella grandiflora
Cagra.1110s0009 1.0kb downstream 1.0kb downstream 2062 true Scaffold1110: 30220-32281 Capsella grandiflora
Cagra.1110s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1110: 30220-31219 Capsella grandiflora
Cagra.1110s0009 2.0kb upstream 2.0kb upstream 3062 true Scaffold1110: 31220-34281 Capsella grandiflora
Cagra.1110s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1110: 32282-34281 Capsella grandiflora
Cagra.1110s0009 2.0kb downstream 2.0kb downstream 3062 true Scaffold1110: 29220-32281 Capsella grandiflora
Cagra.1110s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1110: 29220-31219 Capsella grandiflora
Cagra.1110s0009 5.0kb upstream 5.0kb upstream 6062 true Scaffold1110: 31220-37281 Capsella grandiflora
Cagra.1110s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1110: 32282-37281 Capsella grandiflora
Cagra.1110s0009 5.0kb downstream 5.0kb downstream 6062 true Scaffold1110: 26220-32281 Capsella grandiflora
Cagra.1110s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1110: 26220-31219 Capsella grandiflora
Cagra.1110s0009 10.0kb upstream 10.0kb upstream 11062 true Scaffold1110: 31220-42281 Capsella grandiflora
Cagra.1110s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1110: 32282-42281 Capsella grandiflora
Cagra.1110s0009 10.0kb downstream 10.0kb downstream 11062 true Scaffold1110: 21220-32281 Capsella grandiflora
Cagra.1110s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1110: 21220-31219 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375202 5261 Brassicaceae View MSA
123842802 5264 Brassicales-Malvales View MSA
124323787 5266 SBM View MSA
124253494 5268 Malvidae View MSA
124068722 5270 Rosid View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain