Gene : Cagra.1111s0008 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31429:SF1 - WRKY FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  8
Name:  ? Cagra.1111s0008 Secondary Identifier:  ? PAC:28918359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1111s0008 0.5kb upstream 0.5kb upstream 2065 true Scaffold1111: 26084-28148 Capsella grandiflora
Cagra.1111s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1111: 26084-26583 Capsella grandiflora
Cagra.1111s0008 0.5kb downstream 0.5kb downstream 2065 true Scaffold1111: 26584-28648 Capsella grandiflora
Cagra.1111s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1111: 28149-28648 Capsella grandiflora
Cagra.1111s0008 1.0kb upstream 1.0kb upstream 2565 true Scaffold1111: 25584-28148 Capsella grandiflora
Cagra.1111s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1111: 25584-26583 Capsella grandiflora
Cagra.1111s0008 1.0kb downstream 1.0kb downstream 2565 true Scaffold1111: 26584-29148 Capsella grandiflora
Cagra.1111s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1111: 28149-29148 Capsella grandiflora
Cagra.1111s0008 2.0kb upstream 2.0kb upstream 3565 true Scaffold1111: 24584-28148 Capsella grandiflora
Cagra.1111s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1111: 24584-26583 Capsella grandiflora
Cagra.1111s0008 2.0kb downstream 2.0kb downstream 3565 true Scaffold1111: 26584-30148 Capsella grandiflora
Cagra.1111s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1111: 28149-30148 Capsella grandiflora
Cagra.1111s0008 5.0kb upstream 5.0kb upstream 6565 true Scaffold1111: 21584-28148 Capsella grandiflora
Cagra.1111s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1111: 21584-26583 Capsella grandiflora
Cagra.1111s0008 5.0kb downstream 5.0kb downstream 6565 true Scaffold1111: 26584-33148 Capsella grandiflora
Cagra.1111s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1111: 28149-33148 Capsella grandiflora
Cagra.1111s0008 10.0kb upstream 10.0kb upstream 11565 true Scaffold1111: 16584-28148 Capsella grandiflora
Cagra.1111s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1111: 16584-26583 Capsella grandiflora
Cagra.1111s0008 10.0kb downstream 10.0kb downstream 11565 true Scaffold1111: 26584-38148 Capsella grandiflora
Cagra.1111s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1111: 28149-38148 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361815 5261 Brassicaceae View MSA
123835596 5264 Brassicales-Malvales View MSA
124348518 5266 SBM View MSA
124246003 5268 Malvidae View MSA
124064094 5270 Rosid View MSA
123741240 5271 Pentapetalae View MSA
122792688 5272 Eudicot View MSA
122044544 5273 Angiosperm View MSA
121310308 5274 Embryophyte View MSA
123347826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain