Gene : Cagra.1111s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10994:SF85 - RETICULON-LIKE PROTEIN B14-RELATED Genomic Order:  16
Name:  ? Cagra.1111s0016 Secondary Identifier:  ? PAC:28918352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1111s0016 0.5kb upstream 0.5kb upstream 1774 true Scaffold1111: 58013-59786 Capsella grandiflora
Cagra.1111s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1111: 58013-58512 Capsella grandiflora
Cagra.1111s0016 0.5kb downstream 0.5kb downstream 1774 true Scaffold1111: 58513-60286 Capsella grandiflora
Cagra.1111s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1111: 59787-60286 Capsella grandiflora
Cagra.1111s0016 1.0kb upstream 1.0kb upstream 2274 true Scaffold1111: 57513-59786 Capsella grandiflora
Cagra.1111s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1111: 57513-58512 Capsella grandiflora
Cagra.1111s0016 1.0kb downstream 1.0kb downstream 2274 true Scaffold1111: 58513-60786 Capsella grandiflora
Cagra.1111s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1111: 59787-60786 Capsella grandiflora
Cagra.1111s0016 2.0kb upstream 2.0kb upstream 3274 true Scaffold1111: 56513-59786 Capsella grandiflora
Cagra.1111s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1111: 56513-58512 Capsella grandiflora
Cagra.1111s0016 2.0kb downstream 2.0kb downstream 3274 true Scaffold1111: 58513-61786 Capsella grandiflora
Cagra.1111s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1111: 59787-61786 Capsella grandiflora
Cagra.1111s0016 5.0kb upstream 5.0kb upstream 6274 true Scaffold1111: 53513-59786 Capsella grandiflora
Cagra.1111s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1111: 53513-58512 Capsella grandiflora
Cagra.1111s0016 5.0kb downstream 5.0kb downstream 6274 true Scaffold1111: 58513-64786 Capsella grandiflora
Cagra.1111s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1111: 59787-64786 Capsella grandiflora
Cagra.1111s0016 10.0kb upstream 10.0kb upstream 11274 true Scaffold1111: 48513-59786 Capsella grandiflora
Cagra.1111s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1111: 48513-58512 Capsella grandiflora
Cagra.1111s0016 10.0kb downstream 10.0kb downstream 11274 true Scaffold1111: 58513-69786 Capsella grandiflora
Cagra.1111s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1111: 59787-69786 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370907 5261 Brassicaceae View MSA
123800066 5264 Brassicales-Malvales View MSA
124297520 5266 SBM View MSA
124244747 5268 Malvidae View MSA
124065232 5270 Rosid View MSA
123744600 5271 Pentapetalae View MSA
122788689 5272 Eudicot View MSA
122048457 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain