Gene : Cagra.1111s0015 C. grandiflora v1.1
Defline:  (1 of 15) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  15
Name:  ? Cagra.1111s0015 Secondary Identifier:  ? PAC:28918350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1111s0015 0.5kb upstream 0.5kb upstream 2016 true Scaffold1111: 56193-58208 Capsella grandiflora
Cagra.1111s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1111: 56193-56692 Capsella grandiflora
Cagra.1111s0015 0.5kb downstream 0.5kb downstream 2016 true Scaffold1111: 56693-58708 Capsella grandiflora
Cagra.1111s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1111: 58209-58708 Capsella grandiflora
Cagra.1111s0015 1.0kb upstream 1.0kb upstream 2516 true Scaffold1111: 55693-58208 Capsella grandiflora
Cagra.1111s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1111: 55693-56692 Capsella grandiflora
Cagra.1111s0015 1.0kb downstream 1.0kb downstream 2516 true Scaffold1111: 56693-59208 Capsella grandiflora
Cagra.1111s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1111: 58209-59208 Capsella grandiflora
Cagra.1111s0015 2.0kb upstream 2.0kb upstream 3516 true Scaffold1111: 54693-58208 Capsella grandiflora
Cagra.1111s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1111: 54693-56692 Capsella grandiflora
Cagra.1111s0015 2.0kb downstream 2.0kb downstream 3516 true Scaffold1111: 56693-60208 Capsella grandiflora
Cagra.1111s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1111: 58209-60208 Capsella grandiflora
Cagra.1111s0015 5.0kb upstream 5.0kb upstream 6516 true Scaffold1111: 51693-58208 Capsella grandiflora
Cagra.1111s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1111: 51693-56692 Capsella grandiflora
Cagra.1111s0015 5.0kb downstream 5.0kb downstream 6516 true Scaffold1111: 56693-63208 Capsella grandiflora
Cagra.1111s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1111: 58209-63208 Capsella grandiflora
Cagra.1111s0015 10.0kb upstream 10.0kb upstream 11516 true Scaffold1111: 46693-58208 Capsella grandiflora
Cagra.1111s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1111: 46693-56692 Capsella grandiflora
Cagra.1111s0015 10.0kb downstream 10.0kb downstream 11516 true Scaffold1111: 56693-68208 Capsella grandiflora
Cagra.1111s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1111: 58209-68208 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374030 5261 Brassicaceae View MSA
123827584 5264 Brassicales-Malvales View MSA
124342157 5266 SBM View MSA
124237858 5268 Malvidae View MSA
124065482 5270 Rosid View MSA
123737979 5271 Pentapetalae View MSA
122790075 5272 Eudicot View MSA
122049951 5273 Angiosperm View MSA
121351740 5274 Embryophyte View MSA
123382300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain