Gene : Cagra.1111s0033 C. grandiflora v1.1
Defline:  (1 of 15) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  33
Name:  ? Cagra.1111s0033 Secondary Identifier:  ? PAC:28918356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1111s0033 0.5kb upstream 0.5kb upstream 3444 true Scaffold1111: 132137-135580 Capsella grandiflora
Cagra.1111s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold1111: 135081-135580 Capsella grandiflora
Cagra.1111s0033 0.5kb downstream 0.5kb downstream 3444 true Scaffold1111: 131637-135080 Capsella grandiflora
Cagra.1111s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold1111: 131637-132136 Capsella grandiflora
Cagra.1111s0033 1.0kb upstream 1.0kb upstream 3944 true Scaffold1111: 132137-136080 Capsella grandiflora
Cagra.1111s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold1111: 135081-136080 Capsella grandiflora
Cagra.1111s0033 1.0kb downstream 1.0kb downstream 3944 true Scaffold1111: 131137-135080 Capsella grandiflora
Cagra.1111s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold1111: 131137-132136 Capsella grandiflora
Cagra.1111s0033 2.0kb upstream 2.0kb upstream 4944 true Scaffold1111: 132137-137080 Capsella grandiflora
Cagra.1111s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold1111: 135081-137080 Capsella grandiflora
Cagra.1111s0033 2.0kb downstream 2.0kb downstream 4944 true Scaffold1111: 130137-135080 Capsella grandiflora
Cagra.1111s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold1111: 130137-132136 Capsella grandiflora
Cagra.1111s0033 5.0kb upstream 5.0kb upstream 7944 true Scaffold1111: 132137-140080 Capsella grandiflora
Cagra.1111s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold1111: 135081-140080 Capsella grandiflora
Cagra.1111s0033 5.0kb downstream 5.0kb downstream 7944 true Scaffold1111: 127137-135080 Capsella grandiflora
Cagra.1111s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold1111: 127137-132136 Capsella grandiflora
Cagra.1111s0033 10.0kb upstream 10.0kb upstream 12944 true Scaffold1111: 132137-145080 Capsella grandiflora
Cagra.1111s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold1111: 135081-145080 Capsella grandiflora
Cagra.1111s0033 10.0kb downstream 10.0kb downstream 12944 true Scaffold1111: 122137-135080 Capsella grandiflora
Cagra.1111s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold1111: 122137-132136 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365909 5261 Brassicaceae View MSA
123833857 5264 Brassicales-Malvales View MSA
124341240 5266 SBM View MSA
124239546 5268 Malvidae View MSA
124067229 5270 Rosid View MSA
123739327 5271 Pentapetalae View MSA
122785857 5272 Eudicot View MSA
122046324 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain