Gene : Cagra.1080s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10177:SF234 - CYCLIN-D2-1 Genomic Order:  16
Name:  ? Cagra.1080s0016 Secondary Identifier:  ? PAC:28912265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1080s0016 0.5kb upstream 0.5kb upstream 2898 true Scaffold1080: 75996-78893 Capsella grandiflora
Cagra.1080s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1080: 75996-76495 Capsella grandiflora
Cagra.1080s0016 0.5kb downstream 0.5kb downstream 2898 true Scaffold1080: 76496-79393 Capsella grandiflora
Cagra.1080s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1080: 78894-79393 Capsella grandiflora
Cagra.1080s0016 1.0kb upstream 1.0kb upstream 3398 true Scaffold1080: 75496-78893 Capsella grandiflora
Cagra.1080s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1080: 75496-76495 Capsella grandiflora
Cagra.1080s0016 1.0kb downstream 1.0kb downstream 3398 true Scaffold1080: 76496-79893 Capsella grandiflora
Cagra.1080s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1080: 78894-79893 Capsella grandiflora
Cagra.1080s0016 2.0kb upstream 2.0kb upstream 4398 true Scaffold1080: 74496-78893 Capsella grandiflora
Cagra.1080s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1080: 74496-76495 Capsella grandiflora
Cagra.1080s0016 2.0kb downstream 2.0kb downstream 4398 true Scaffold1080: 76496-80893 Capsella grandiflora
Cagra.1080s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1080: 78894-80893 Capsella grandiflora
Cagra.1080s0016 5.0kb upstream 5.0kb upstream 7398 true Scaffold1080: 71496-78893 Capsella grandiflora
Cagra.1080s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1080: 71496-76495 Capsella grandiflora
Cagra.1080s0016 5.0kb downstream 5.0kb downstream 7398 true Scaffold1080: 76496-83893 Capsella grandiflora
Cagra.1080s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1080: 78894-83893 Capsella grandiflora
Cagra.1080s0016 10.0kb upstream 10.0kb upstream 12398 true Scaffold1080: 66496-78893 Capsella grandiflora
Cagra.1080s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1080: 66496-76495 Capsella grandiflora
Cagra.1080s0016 10.0kb downstream 10.0kb downstream 12398 true Scaffold1080: 76496-88893 Capsella grandiflora
Cagra.1080s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1080: 78894-88893 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374144 5261 Brassicaceae View MSA
123832135 5264 Brassicales-Malvales View MSA
124350508 5266 SBM View MSA
124249718 5268 Malvidae View MSA
124071667 5270 Rosid View MSA
123751076 5271 Pentapetalae View MSA
122794898 5272 Eudicot View MSA
122046466 5273 Angiosperm View MSA
121350196 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain