Gene : Cagra.1085s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11804:SF49 - ORGANELLAR OLIGOPEPTIDASE A, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  5
Name:  ? Cagra.1085s0005 Secondary Identifier:  ? PAC:28900595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0005 0.5kb upstream 0.5kb upstream 5268 true Scaffold1085: 17633-22900 Capsella grandiflora
Cagra.1085s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 22401-22900 Capsella grandiflora
Cagra.1085s0005 0.5kb downstream 0.5kb downstream 5268 true Scaffold1085: 17133-22400 Capsella grandiflora
Cagra.1085s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 17133-17632 Capsella grandiflora
Cagra.1085s0005 1.0kb upstream 1.0kb upstream 5768 true Scaffold1085: 17633-23400 Capsella grandiflora
Cagra.1085s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 22401-23400 Capsella grandiflora
Cagra.1085s0005 1.0kb downstream 1.0kb downstream 5768 true Scaffold1085: 16633-22400 Capsella grandiflora
Cagra.1085s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 16633-17632 Capsella grandiflora
Cagra.1085s0005 2.0kb upstream 2.0kb upstream 6768 true Scaffold1085: 17633-24400 Capsella grandiflora
Cagra.1085s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 22401-24400 Capsella grandiflora
Cagra.1085s0005 2.0kb downstream 2.0kb downstream 6768 true Scaffold1085: 15633-22400 Capsella grandiflora
Cagra.1085s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 15633-17632 Capsella grandiflora
Cagra.1085s0005 5.0kb upstream 5.0kb upstream 9768 true Scaffold1085: 17633-27400 Capsella grandiflora
Cagra.1085s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 22401-27400 Capsella grandiflora
Cagra.1085s0005 5.0kb downstream 5.0kb downstream 9768 true Scaffold1085: 12633-22400 Capsella grandiflora
Cagra.1085s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 12633-17632 Capsella grandiflora
Cagra.1085s0005 10.0kb upstream 10.0kb upstream 14768 true Scaffold1085: 17633-32400 Capsella grandiflora
Cagra.1085s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 22401-32400 Capsella grandiflora
Cagra.1085s0005 10.0kb downstream 10.0kb downstream 14768 true Scaffold1085: 7633-22400 Capsella grandiflora
Cagra.1085s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 7633-17632 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363234 5261 Brassicaceae View MSA
123838261 5264 Brassicales-Malvales View MSA
124338453 5266 SBM View MSA
124248514 5268 Malvidae View MSA
124074910 5270 Rosid View MSA
123737764 5271 Pentapetalae View MSA
122786245 5272 Eudicot View MSA
122050294 5273 Angiosperm View MSA
121346045 5274 Embryophyte View MSA
123424293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain