Gene : Cagra.1085s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR27001:SF105 - PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  7
Name:  ? Cagra.1085s0007 Secondary Identifier:  ? PAC:28900555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0007 0.5kb upstream 0.5kb upstream 3634 true Scaffold1085: 26798-30431 Capsella grandiflora
Cagra.1085s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 26798-27297 Capsella grandiflora
Cagra.1085s0007 0.5kb downstream 0.5kb downstream 3634 true Scaffold1085: 27298-30931 Capsella grandiflora
Cagra.1085s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 30432-30931 Capsella grandiflora
Cagra.1085s0007 1.0kb upstream 1.0kb upstream 4134 true Scaffold1085: 26298-30431 Capsella grandiflora
Cagra.1085s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 26298-27297 Capsella grandiflora
Cagra.1085s0007 1.0kb downstream 1.0kb downstream 4134 true Scaffold1085: 27298-31431 Capsella grandiflora
Cagra.1085s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 30432-31431 Capsella grandiflora
Cagra.1085s0007 2.0kb upstream 2.0kb upstream 5134 true Scaffold1085: 25298-30431 Capsella grandiflora
Cagra.1085s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 25298-27297 Capsella grandiflora
Cagra.1085s0007 2.0kb downstream 2.0kb downstream 5134 true Scaffold1085: 27298-32431 Capsella grandiflora
Cagra.1085s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 30432-32431 Capsella grandiflora
Cagra.1085s0007 5.0kb upstream 5.0kb upstream 8134 true Scaffold1085: 22298-30431 Capsella grandiflora
Cagra.1085s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 22298-27297 Capsella grandiflora
Cagra.1085s0007 5.0kb downstream 5.0kb downstream 8134 true Scaffold1085: 27298-35431 Capsella grandiflora
Cagra.1085s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 30432-35431 Capsella grandiflora
Cagra.1085s0007 10.0kb upstream 10.0kb upstream 13134 true Scaffold1085: 17298-30431 Capsella grandiflora
Cagra.1085s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 17298-27297 Capsella grandiflora
Cagra.1085s0007 10.0kb downstream 10.0kb downstream 13134 true Scaffold1085: 27298-40431 Capsella grandiflora
Cagra.1085s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 30432-40431 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375153 5261 Brassicaceae View MSA
123840795 5264 Brassicales-Malvales View MSA
124350781 5266 SBM View MSA
124238413 5268 Malvidae View MSA
124063504 5270 Rosid View MSA
123745294 5271 Pentapetalae View MSA
122793623 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain