Gene : Cagra.1085s0034 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32370:SF37 - BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED Genomic Order:  34
Name:  ? Cagra.1085s0034 Secondary Identifier:  ? PAC:28900592
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0034 0.5kb upstream 0.5kb upstream 3116 true Scaffold1085: 129196-132311 Capsella grandiflora
Cagra.1085s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 129196-129695 Capsella grandiflora
Cagra.1085s0034 0.5kb downstream 0.5kb downstream 3116 true Scaffold1085: 129696-132811 Capsella grandiflora
Cagra.1085s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 132312-132811 Capsella grandiflora
Cagra.1085s0034 1.0kb upstream 1.0kb upstream 3616 true Scaffold1085: 128696-132311 Capsella grandiflora
Cagra.1085s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 128696-129695 Capsella grandiflora
Cagra.1085s0034 1.0kb downstream 1.0kb downstream 3616 true Scaffold1085: 129696-133311 Capsella grandiflora
Cagra.1085s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 132312-133311 Capsella grandiflora
Cagra.1085s0034 2.0kb upstream 2.0kb upstream 4616 true Scaffold1085: 127696-132311 Capsella grandiflora
Cagra.1085s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 127696-129695 Capsella grandiflora
Cagra.1085s0034 2.0kb downstream 2.0kb downstream 4616 true Scaffold1085: 129696-134311 Capsella grandiflora
Cagra.1085s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 132312-134311 Capsella grandiflora
Cagra.1085s0034 5.0kb upstream 5.0kb upstream 7616 true Scaffold1085: 124696-132311 Capsella grandiflora
Cagra.1085s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 124696-129695 Capsella grandiflora
Cagra.1085s0034 5.0kb downstream 5.0kb downstream 7616 true Scaffold1085: 129696-137311 Capsella grandiflora
Cagra.1085s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 132312-137311 Capsella grandiflora
Cagra.1085s0034 10.0kb upstream 10.0kb upstream 12616 true Scaffold1085: 119696-132311 Capsella grandiflora
Cagra.1085s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 119696-129695 Capsella grandiflora
Cagra.1085s0034 10.0kb downstream 10.0kb downstream 12616 true Scaffold1085: 129696-142311 Capsella grandiflora
Cagra.1085s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 132312-142311 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377970 5261 Brassicaceae View MSA
123836579 5264 Brassicales-Malvales View MSA
124338471 5266 SBM View MSA
124244356 5268 Malvidae View MSA
124072308 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain