Gene : Cagra.1085s0051 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  51
Name:  ? Cagra.1085s0051 Secondary Identifier:  ? PAC:28900601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0051 0.5kb upstream 0.5kb upstream 3262 true Scaffold1085: 198360-201621 Capsella grandiflora
Cagra.1085s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 198360-198859 Capsella grandiflora
Cagra.1085s0051 0.5kb downstream 0.5kb downstream 3262 true Scaffold1085: 198860-202121 Capsella grandiflora
Cagra.1085s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 201622-202121 Capsella grandiflora
Cagra.1085s0051 1.0kb upstream 1.0kb upstream 3762 true Scaffold1085: 197860-201621 Capsella grandiflora
Cagra.1085s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 197860-198859 Capsella grandiflora
Cagra.1085s0051 1.0kb downstream 1.0kb downstream 3762 true Scaffold1085: 198860-202621 Capsella grandiflora
Cagra.1085s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 201622-202621 Capsella grandiflora
Cagra.1085s0051 2.0kb upstream 2.0kb upstream 4762 true Scaffold1085: 196860-201621 Capsella grandiflora
Cagra.1085s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 196860-198859 Capsella grandiflora
Cagra.1085s0051 2.0kb downstream 2.0kb downstream 4762 true Scaffold1085: 198860-203621 Capsella grandiflora
Cagra.1085s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 201622-203621 Capsella grandiflora
Cagra.1085s0051 5.0kb upstream 5.0kb upstream 7762 true Scaffold1085: 193860-201621 Capsella grandiflora
Cagra.1085s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 193860-198859 Capsella grandiflora
Cagra.1085s0051 5.0kb downstream 5.0kb downstream 7762 true Scaffold1085: 198860-206621 Capsella grandiflora
Cagra.1085s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 201622-206621 Capsella grandiflora
Cagra.1085s0051 10.0kb upstream 10.0kb upstream 12762 true Scaffold1085: 188860-201621 Capsella grandiflora
Cagra.1085s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 188860-198859 Capsella grandiflora
Cagra.1085s0051 10.0kb downstream 10.0kb downstream 12762 true Scaffold1085: 198860-211621 Capsella grandiflora
Cagra.1085s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 201622-211621 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369692 5261 Brassicaceae View MSA
123840153 5264 Brassicales-Malvales View MSA
124344204 5266 SBM View MSA
124251987 5268 Malvidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain